Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SNORD113.3-201ENST00000364630 78 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 RNU6-597P-201ENST00000365620 102 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 MIR624-201ENST00000385217 97 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 AC006461.1-201ENST00000412637 326 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.98□□□□□ -2.25
ATP2A1O14983 RNU7-80P-201ENST00000459562 61 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 RNU6-138P-201ENST00000515952 107 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 MIR4264-201ENST00000583520 66 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 AL020996.3-201ENST00000606617 222 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 MIR8055-201ENST00000610739 97 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 Z97988.1-201ENST00000637697 135 ntBASIC0.98□□□□□ -2.25
ATP2A1O14983 SNORA25.7-201ENST00000364375 127 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 Y_RNA.257-201ENST00000364596 102 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 Y_RNA.351-201ENST00000365436 96 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 Y_RNA.454-201ENST00000384224 113 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 RNU6-125P-201ENST00000384505 107 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 SNORA2B-201ENST00000384583 137 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 AC090844.1-201ENST00000422019 156 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 FABP5P4-201ENST00000437203 171 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 AC107027.2-201ENST00000512197 115 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 RNU6-1219P-201ENST00000516143 112 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 AC022559.1-201ENST00000520905 205 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 AP002392.1-201ENST00000537692 208 ntBASIC0.97□□□□□ -2.25
ATP2A1O14983 MIR342-201ENST00000362212 99 ntBASIC0.96□□□□□ -2.26
ATP2A1O14983 MIR942-201ENST00000401111 86 ntBASIC0.96□□□□□ -2.26
ATP2A1O14983 RNA5SP95-201ENST00000410319 137 ntBASIC0.96□□□□□ -2.26
ATP2A1O14983 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.96□□□□□ -2.26
ATP2A1O14983 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.96□□□□□ -2.26
ATP2A1O14983 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.96□□□□□ -2.26
ATP2A1O14983 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
ATP2A1O14983 MIR302B-201ENST00000362188 73 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 SNORA1.1-201ENST00000364671 133 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 RNU6-580P-201ENST00000365159 107 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 Y_RNA.521-201ENST00000384560 114 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 SNORD38B-201ENST00000384690 67 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 SEPT7P4-201ENST00000437076 306 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 RNU7-120P-201ENST00000459334 63 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 AC091932.4-201ENST00000623386 200 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 SNORD38B-202ENST00000625943 69 ntBASIC0.95□□□□□ -2.26
ATP2A1O14983 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ATP2A1O14983 Y_RNA.29-201ENST00000362570 113 ntBASIC0.94□□□□□ -2.26
ATP2A1O14983 Y_RNA.393-201ENST00000383936 102 ntBASIC0.94□□□□□ -2.26
ATP2A1O14983 RNU6-994P-201ENST00000410507 111 ntBASIC0.94□□□□□ -2.26
ATP2A1O14983 RNA5SP261-201ENST00000410536 106 ntBASIC0.94□□□□□ -2.26
ATP2A1O14983 HMGN1P33-201ENST00000432945 451 ntBASIC0.94□□□□□ -2.26
ATP2A1O14983 RNU6-94P-201ENST00000607728 107 ntBASIC0.94□□□□□ -2.26
ATP2A1O14983 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
ATP2A1O14983 Y_RNA.240-201ENST00000364469 95 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 RNU1-133P-201ENST00000364867 167 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 Y_RNA.785-201ENST00000384290 109 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 MIR598-201ENST00000384868 97 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 RNU6-1190P-201ENST00000410811 104 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 POLR2J4-204ENST00000418424 324 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 AC067940.1-201ENST00000458411 300 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 PDCD5P2-201ENST00000507570 312 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 SCARNA15-202ENST00000516881 127 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 RNU7-70P-201ENST00000516941 66 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.93□□□□□ -2.26
ATP2A1O14983 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 Y_RNA.337-201ENST00000365312 102 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 Y_RNA.466-201ENST00000384294 113 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 RNU6-768P-201ENST00000384683 107 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 RNU6-205P-201ENST00000390858 107 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 RNU6-602P-201ENST00000411155 105 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 AC244023.1-201ENST00000426884 112 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 RNA5SP255-201ENST00000516370 107 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 SNORA81.3-201ENST00000517283 198 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.92□□□□□ -2.26
ATP2A1O14983 AC242498.1-201ENST00000604134 111 ntBASIC0.92□□□□□ -2.26
ATP2A1O14983 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
ATP2A1O14983 Y_RNA.357-201ENST00000365487 109 ntBASIC0.91□□□□□ -2.26
ATP2A1O14983 RNU6-342P-201ENST00000384521 104 ntBASIC0.91□□□□□ -2.26
ATP2A1O14983 MIR613-201ENST00000385248 95 ntBASIC0.91□□□□□ -2.26
ATP2A1O14983 SNORA26.6-201ENST00000391256 115 ntBASIC0.91□□□□□ -2.26
ATP2A1O14983 U7.7-201ENST00000459276 60 ntBASIC0.91□□□□□ -2.26
ATP2A1O14983 RNU6-1149P-201ENST00000516810 97 ntBASIC0.91□□□□□ -2.26
ATP2A1O14983 MIR6717-201ENST00000622747 73 ntBASIC0.91□□□□□ -2.26
ATP2A1O14983 AL596211.1-201ENST00000569873 2277 ntBASIC0.91□□□□□ -2.26
ATP2A1O14983 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
ATP2A1O14983 RNU4-84P-201ENST00000364200 139 ntBASIC0.9□□□□□ -2.27
ATP2A1O14983 RNU6-239P-201ENST00000390990 99 ntBASIC0.9□□□□□ -2.27
ATP2A1O14983 RPS3AP1-201ENST00000413190 320 ntBASIC0.9□□□□□ -2.27
ATP2A1O14983 RNU7-62P-201ENST00000458856 62 ntBASIC0.9□□□□□ -2.27
ATP2A1O14983 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
ATP2A1O14983 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
ATP2A1O14983 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
ATP2A1O14983 RNU6-682P-201ENST00000363843 106 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 Y_RNA.430-201ENST00000384081 110 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 RNU6-1319P-201ENST00000390855 104 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 RNU6-747P-201ENST00000390928 104 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 RNU6-241P-201ENST00000391148 104 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 SNORA75.5-201ENST00000391291 81 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 RNU6-177P-201ENST00000411257 104 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms