Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MIR548L-201ENST00000408303 86 ntBASIC-0.33□□□□□ -2.46
UPK1AO00322 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.33□□□□□ -2.46
UPK1AO00322 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.33□□□□□ -2.46
UPK1AO00322 RNU6-277P-201ENST00000516272 106 ntBASIC-0.33□□□□□ -2.46
UPK1AO00322 AP003072.1-201ENST00000531740 145 ntBASIC-0.33□□□□□ -2.46
UPK1AO00322 AC093783.1-201ENST00000612976 329 ntBASIC-0.33□□□□□ -2.46
UPK1AO00322 AL596211.1-201ENST00000569873 2277 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 RNU4-10P-201ENST00000364383 140 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 SNORA53-201ENST00000391141 249 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 MIR548H2-201ENST00000408874 88 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 RNA5SP163-201ENST00000410304 99 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 SNORA25.16-201ENST00000516741 121 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 DEFB131E-201ENST00000532329 154 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 AL109933.3-201ENST00000619095 188 ntBASIC-0.34□□□□□ -2.46
UPK1AO00322 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.35□□□□□ -2.47
UPK1AO00322 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.35□□□□□ -2.47
UPK1AO00322 SNORA8.3-201ENST00000384679 139 ntBASIC-0.35□□□□□ -2.47
UPK1AO00322 RNU2-55P-201ENST00000411146 174 ntBASIC-0.35□□□□□ -2.47
UPK1AO00322 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.35□□□□□ -2.47
UPK1AO00322 U7.6-201ENST00000610841 64 ntBASIC-0.35□□□□□ -2.47
UPK1AO00322 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 RNU6-756P-201ENST00000383997 107 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 RNU6-662P-201ENST00000384253 104 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 RNU7-165P-201ENST00000458864 60 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 RNU6-475P-201ENST00000516073 104 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 RNU7-70P-201ENST00000516941 66 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.36□□□□□ -2.47
UPK1AO00322 AC091932.4-201ENST00000623386 200 ntBASIC-0.36□□□□□ -2.47
UPK1AO00322 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 RNU6-290P-201ENST00000365212 101 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 SNORD114-12-201ENST00000365400 75 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 SNORA63.7-201ENST00000365579 123 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 MIR214-201ENST00000385214 110 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 AL731563.1-201ENST00000442202 214 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 SNORD4A-201ENST00000459174 72 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 SNORD19B-201ENST00000459623 84 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 RNA5SP153-201ENST00000516498 76 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 MIR6779-201ENST00000617283 64 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 AC090574.1-201ENST00000623186 233 ntBASIC-0.37□□□□□ -2.47
UPK1AO00322 SNORA22.1-201ENST00000362701 134 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 SNORA18.1-201ENST00000363418 128 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 RNU4-40P-201ENST00000364351 143 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 SNORA18-201ENST00000384416 132 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 MIR106A-201ENST00000384870 81 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 SNORD115-46-201ENST00000390982 71 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 MIR1302-11-201ENST00000408051 138 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 MIR1302-9-201ENST00000408365 138 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 MIR1302-10-201ENST00000408734 138 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 RNA5SP127-201ENST00000411051 133 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 AC096949.1-201ENST00000412047 152 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 RNU2-60P-201ENST00000517290 128 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 MIR1302-2-201ENST00000607096 138 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 AL132765.2-201ENST00000610812 351 ntBASIC-0.38□□□□□ -2.47
UPK1AO00322 MIR101-2-201ENST00000362195 79 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 RNU4-58P-201ENST00000363192 141 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 RNU6-484P-201ENST00000384016 107 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 RNU4-70P-201ENST00000384579 139 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 MIR501-201ENST00000390204 84 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 MIR5706-201ENST00000579841 80 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 RNU1-29P-201ENST00000606574 126 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 AL008718.3-201ENST00000610217 321 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 snoU18.1-201ENST00000629629 71 ntBASIC-0.39□□□□□ -2.47
UPK1AO00322 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.4□□□□□ -2.47
UPK1AO00322 SNORD115-24-201ENST00000363528 82 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 RNA5SP457-201ENST00000363657 124 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 RNY1P13-201ENST00000365030 105 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 RNU6-326P-201ENST00000365480 107 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 SNORA1-201ENST00000384107 130 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 RNY3P5-201ENST00000384127 102 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 AC138393.2-201ENST00000414742 246 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 RNU6-531P-201ENST00000516694 104 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
UPK1AO00322 MIR5197-201ENST00000583721 112 ntBASIC-0.4□□□□□ -2.47
UPK1AO00322 RNU6-161P-201ENST00000363051 106 ntBASIC-0.41□□□□□ -2.48
UPK1AO00322 SNORA63.5-201ENST00000363548 123 ntBASIC-0.41□□□□□ -2.48
UPK1AO00322 RNA5SP275-201ENST00000363936 118 ntBASIC-0.41□□□□□ -2.48
UPK1AO00322 RNA5SP245-201ENST00000364239 121 ntBASIC-0.41□□□□□ -2.48
UPK1AO00322 RNU6-46P-201ENST00000383860 107 ntBASIC-0.41□□□□□ -2.48
UPK1AO00322 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.41□□□□□ -2.48
UPK1AO00322 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms