Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 7SK.13-201ENST00000622040 250 ntBASIC1.75□□□□□ -2.13
CBX4O00257 Y_RNA.355-201ENST00000365462 98 ntBASIC1.74□□□□□ -2.13
CBX4O00257 RNU6-1081P-201ENST00000384537 107 ntBASIC1.74□□□□□ -2.13
CBX4O00257 Y_RNA.617-201ENST00000410920 90 ntBASIC1.74□□□□□ -2.13
CBX4O00257 AL133373.1-201ENST00000497098 94 ntBASIC1.74□□□□□ -2.13
CBX4O00257 RNU6-313P-201ENST00000516317 112 ntBASIC1.74□□□□□ -2.13
CBX4O00257 RNU6-479P-201ENST00000516348 105 ntBASIC1.74□□□□□ -2.13
CBX4O00257 CYP3A52P-201ENST00000563326 91 ntBASIC1.74□□□□□ -2.13
CBX4O00257 MIR548AO-201ENST00000579992 96 ntBASIC1.74□□□□□ -2.13
CBX4O00257 MIR4305-201ENST00000583252 102 ntBASIC1.74□□□□□ -2.13
CBX4O00257 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
CBX4O00257 MIR8070-201ENST00000616510 88 ntBASIC1.74□□□□□ -2.13
CBX4O00257 MIR6717-201ENST00000622747 73 ntBASIC1.74□□□□□ -2.13
CBX4O00257 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CBX4O00257 RNU6-1154P-201ENST00000391001 104 ntBASIC1.73□□□□□ -2.13
CBX4O00257 AL022718.1-201ENST00000412004 84 ntBASIC1.73□□□□□ -2.13
CBX4O00257 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.73□□□□□ -2.13
CBX4O00257 RPS3AP1-201ENST00000413190 320 ntBASIC1.73□□□□□ -2.13
CBX4O00257 RNU7-107P-201ENST00000459121 61 ntBASIC1.73□□□□□ -2.13
CBX4O00257 RNU6-772P-201ENST00000516042 105 ntBASIC1.73□□□□□ -2.13
CBX4O00257 AL359821.1-201ENST00000605519 182 ntBASIC1.73□□□□□ -2.13
CBX4O00257 AL365222.1-201ENST00000614661 98 ntBASIC1.73□□□□□ -2.13
CBX4O00257 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CBX4O00257 AL161722.3-201ENST00000605789 2983 ntBASIC1.73□□□□□ -2.13
CBX4O00257 RNU2-51P-201ENST00000410708 197 ntBASIC1.72□□□□□ -2.13
CBX4O00257 RNU6-1190P-201ENST00000410811 104 ntBASIC1.72□□□□□ -2.13
CBX4O00257 RNU7-164P-201ENST00000459221 62 ntBASIC1.72□□□□□ -2.13
CBX4O00257 TRMT112P2-201ENST00000512910 132 ntBASIC1.72□□□□□ -2.13
CBX4O00257 SNORA31.4-201ENST00000516049 129 ntBASIC1.72□□□□□ -2.13
CBX4O00257 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
CBX4O00257 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
CBX4O00257 MIR8055-201ENST00000610739 97 ntBASIC1.72□□□□□ -2.13
CBX4O00257 SNORA22.1-201ENST00000362701 134 ntBASIC1.71□□□□□ -2.14
CBX4O00257 Y_RNA.354-201ENST00000365448 111 ntBASIC1.71□□□□□ -2.14
CBX4O00257 RNA5SP144-201ENST00000410846 116 ntBASIC1.71□□□□□ -2.14
CBX4O00257 RNA5SP136-201ENST00000410906 107 ntBASIC1.71□□□□□ -2.14
CBX4O00257 HMGN1P33-201ENST00000432945 451 ntBASIC1.71□□□□□ -2.14
CBX4O00257 RNU6-659P-201ENST00000516454 104 ntBASIC1.71□□□□□ -2.14
CBX4O00257 MIR548AI-201ENST00000579940 88 ntBASIC1.71□□□□□ -2.14
CBX4O00257 Z97988.1-201ENST00000637697 135 ntBASIC1.71□□□□□ -2.14
CBX4O00257 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CBX4O00257 SNORA25.3-201ENST00000363205 127 ntBASIC1.7□□□□□ -2.14
CBX4O00257 SNORD58C-201ENST00000365223 64 ntBASIC1.7□□□□□ -2.14
CBX4O00257 Y_RNA.430-201ENST00000384081 110 ntBASIC1.7□□□□□ -2.14
CBX4O00257 RNU6-1168P-201ENST00000390831 104 ntBASIC1.7□□□□□ -2.14
CBX4O00257 SNORA26.6-201ENST00000391256 115 ntBASIC1.7□□□□□ -2.14
CBX4O00257 MIR1263-201ENST00000408324 86 ntBASIC1.7□□□□□ -2.14
CBX4O00257 AC245047.7-201ENST00000440265 293 ntBASIC1.7□□□□□ -2.14
CBX4O00257 Y_RNA.712-201ENST00000517011 92 ntBASIC1.7□□□□□ -2.14
CBX4O00257 RNU6-165P-201ENST00000517170 99 ntBASIC1.7□□□□□ -2.14
CBX4O00257 MIR103A2-201ENST00000362154 78 ntBASIC1.69□□□□□ -2.14
CBX4O00257 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
CBX4O00257 Y_RNA.298-201ENST00000364960 107 ntBASIC1.69□□□□□ -2.14
CBX4O00257 SNORD38B-201ENST00000384690 67 ntBASIC1.69□□□□□ -2.14
CBX4O00257 MIR499A-201ENST00000384903 122 ntBASIC1.69□□□□□ -2.14
CBX4O00257 MIR548I2-201ENST00000408348 149 ntBASIC1.69□□□□□ -2.14
CBX4O00257 RNU7-95P-201ENST00000459222 64 ntBASIC1.69□□□□□ -2.14
CBX4O00257 RNU6-781P-201ENST00000516377 101 ntBASIC1.69□□□□□ -2.14
CBX4O00257 RNY4P20-201ENST00000516678 93 ntBASIC1.69□□□□□ -2.14
CBX4O00257 IGKV1-22-201ENST00000524313 326 ntBASIC1.69□□□□□ -2.14
CBX4O00257 SNORD38B-202ENST00000625943 69 ntBASIC1.69□□□□□ -2.14
CBX4O00257 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CBX4O00257 Y_RNA.261-201ENST00000364631 102 ntBASIC1.68□□□□□ -2.14
CBX4O00257 Y_RNA.346-201ENST00000365385 112 ntBASIC1.68□□□□□ -2.14
CBX4O00257 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
CBX4O00257 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.68□□□□□ -2.14
CBX4O00257 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.68□□□□□ -2.14
CBX4O00257 AL359881.1-201ENST00000602916 267 ntBASIC1.68□□□□□ -2.14
CBX4O00257 BX248123.2-201ENST00000606318 124 ntBASIC1.68□□□□□ -2.14
CBX4O00257 AC025166.1-201ENST00000612411 163 ntBASIC1.68□□□□□ -2.14
CBX4O00257 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.68□□□□□ -2.14
CBX4O00257 RNA5SP264-201ENST00000363115 107 ntBASIC1.67□□□□□ -2.14
CBX4O00257 RNU6-396P-201ENST00000365369 105 ntBASIC1.67□□□□□ -2.14
CBX4O00257 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
CBX4O00257 POLR2J4-204ENST00000418424 324 ntBASIC1.67□□□□□ -2.14
CBX4O00257 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
CBX4O00257 RNU7-113P-201ENST00000459273 62 ntBASIC1.67□□□□□ -2.14
CBX4O00257 RNU7-123P-201ENST00000515911 60 ntBASIC1.67□□□□□ -2.14
CBX4O00257 MIR2115-201ENST00000516657 100 ntBASIC1.67□□□□□ -2.14
CBX4O00257 RNU11-2P-201ENST00000516898 142 ntBASIC1.67□□□□□ -2.14
CBX4O00257 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
CBX4O00257 AL645939.4-201ENST00000604495 135 ntBASIC1.67□□□□□ -2.14
CBX4O00257 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
CBX4O00257 U6.95-201ENST00000636931 70 ntBASIC1.67□□□□□ -2.14
CBX4O00257 MIR6841-201ENST00000637129 72 ntBASIC1.67□□□□□ -2.14
CBX4O00257 MIR3914-2-201ENST00000637339 95 ntBASIC1.67□□□□□ -2.14
CBX4O00257 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CBX4O00257 SNORA25.9-201ENST00000365087 128 ntBASIC1.66□□□□□ -2.14
CBX4O00257 Y_RNA.528-201ENST00000384575 108 ntBASIC1.66□□□□□ -2.14
CBX4O00257 SNORA22C-201ENST00000384614 134 ntBASIC1.66□□□□□ -2.14
CBX4O00257 MIR759-201ENST00000390224 91 ntBASIC1.66□□□□□ -2.14
CBX4O00257 RNU6-602P-201ENST00000411155 105 ntBASIC1.66□□□□□ -2.14
CBX4O00257 RNU6-1054P-201ENST00000411293 104 ntBASIC1.66□□□□□ -2.14
CBX4O00257 snoU13.25-201ENST00000458945 104 ntBASIC1.66□□□□□ -2.14
CBX4O00257 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.66□□□□□ -2.14
CBX4O00257 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CBX4O00257 Y_RNA.213-201ENST00000364178 111 ntBASIC1.65□□□□□ -2.15
CBX4O00257 RNA5SP205-201ENST00000364653 136 ntBASIC1.65□□□□□ -2.15
CBX4O00257 Y_RNA.291-201ENST00000364886 113 ntBASIC1.65□□□□□ -2.15
CBX4O00257 Y_RNA.525-201ENST00000384570 113 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms