Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AL137790.1-201ENST00000634283 177 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
RNF223E7ERA6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RNF223E7ERA6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RNF223E7ERA6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
RNF223E7ERA6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RNF223E7ERA6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNF223E7ERA6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RNF223E7ERA6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.78□□□□□ -1.96
RNF223E7ERA6 RNU6-1123P-201ENST00000362347 106 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 SNORA5B-201ENST00000363786 132 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 MIR653-201ENST00000385279 96 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 MT-TF-201ENST00000387314 71 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 RN7SKP83-201ENST00000516512 178 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 RNU11-2P-201ENST00000516898 142 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 MIR3140-201ENST00000583685 90 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 U7.8-201ENST00000619968 63 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 TRDV1-202ENST00000621643 102 ntBASIC2.78□□□□□ -1.96
RNF223E7ERA6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RNF223E7ERA6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNF223E7ERA6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNF223E7ERA6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.97
RNF223E7ERA6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF223E7ERA6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RNF223E7ERA6 RNU1-148P-201ENST00000384472 162 ntBASIC2.77□□□□□ -1.97
RNF223E7ERA6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RNF223E7ERA6 SNORA9.3-201ENST00000516383 129 ntBASIC2.77□□□□□ -1.97
RNF223E7ERA6 SNORA31.15-201ENST00000516771 132 ntBASIC2.77□□□□□ -1.97
RNF223E7ERA6 MIR4264-201ENST00000583520 66 ntBASIC2.77□□□□□ -1.97
RNF223E7ERA6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
RNF223E7ERA6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF223E7ERA6 RNU6-664P-201ENST00000362381 107 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 RNA5SP42-201ENST00000364278 115 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 RNU6-396P-201ENST00000365369 105 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 MIR3074-201ENST00000384885 81 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 MIR519A1-201ENST00000385257 85 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF223E7ERA6 AC105272.1-201ENST00000438604 198 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF223E7ERA6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF223E7ERA6 RN7SL863P-201ENST00000462370 296 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 MIR5089-201ENST00000580047 84 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 AC006023.1-201ENST00000603944 259 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
RNF223E7ERA6 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.76□□□□□ -1.97
RNF223E7ERA6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
RNF223E7ERA6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RNF223E7ERA6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
RNF223E7ERA6 AP006437.1-201ENST00000641440 3685 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNF223E7ERA6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RNF223E7ERA6 SNORD101-201ENST00000384027 73 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 SNORA44-201ENST00000384584 132 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 MIR518A2-201ENST00000384966 87 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 RNA5SP501-201ENST00000410990 112 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 RNU7-195P-201ENST00000458793 62 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 SNORA25.16-201ENST00000516741 121 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 MIR4491-201ENST00000581087 68 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 MIR4696-201ENST00000581431 70 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 AP000942.3-201ENST00000603702 160 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 U6.98-201ENST00000637157 84 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 AC108206.1-201ENST00000570186 4159 ntBASIC2.75□□□□□ -1.97
RNF223E7ERA6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RNF223E7ERA6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
RNF223E7ERA6 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF223E7ERA6 SNORA24B-201ENST00000384176 131 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 SNORA40.6-201ENST00000391153 128 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 SNORD100-201ENST00000408573 76 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 MIR1302-7-201ENST00000408841 72 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 AL606490.4-201ENST00000423117 127 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 AC006989.1-201ENST00000427212 131 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 TRAJ51-201ENST00000504127 63 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.74□□□□□ -1.97
RNF223E7ERA6 SNORD111.1-201ENST00000516421 86 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 AC026333.2-201ENST00000542164 106 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 MIR4738-201ENST00000579134 87 ntBASIC2.74□□□□□ -1.97
RNF223E7ERA6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF223E7ERA6 RNU6-824P-201ENST00000363724 104 ntBASIC2.73□□□□□ -1.97
RNF223E7ERA6 Y_RNA.536-201ENST00000384621 113 ntBASIC2.73□□□□□ -1.97
RNF223E7ERA6 RNU6-604P-201ENST00000390917 100 ntBASIC2.73□□□□□ -1.97
RNF223E7ERA6 RNU7-62P-201ENST00000458856 62 ntBASIC2.73□□□□□ -1.97
RNF223E7ERA6 SNORA70.14-201ENST00000516205 110 ntBASIC2.73□□□□□ -1.97
RNF223E7ERA6 RNU7-10P-201ENST00000607194 63 ntBASIC2.73□□□□□ -1.97
RNF223E7ERA6 AC093010.3-201ENST00000570269 15214 ntBASIC2.73□□□□□ -1.97
RNF223E7ERA6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF223E7ERA6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
RNF223E7ERA6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF223E7ERA6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
RNF223E7ERA6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RNF223E7ERA6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RNF223E7ERA6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF223E7ERA6 RNU6-1260P-201ENST00000362944 107 ntBASIC2.72□□□□□ -1.97
RNF223E7ERA6 MIR627-201ENST00000384979 97 ntBASIC2.72□□□□□ -1.97
RNF223E7ERA6 Y_RNA.588-201ENST00000391254 102 ntBASIC2.72□□□□□ -1.97
RNF223E7ERA6 Y_RNA.809-201ENST00000516058 95 ntBASIC2.72□□□□□ -1.97
RNF223E7ERA6 DEFB122-202ENST00000569013 197 ntBASIC2.72□□□□□ -1.97
RNF223E7ERA6 AL033523.1-201ENST00000605153 153 ntBASIC2.72□□□□□ -1.97
RNF223E7ERA6 RNVU1-4-201ENST00000612985 164 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms