Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU6-690P-201ENST00000365242 106 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 AL392103.1-201ENST00000447000 198 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 RNU11-2P-201ENST00000516898 142 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 MIR3152-201ENST00000579801 74 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 HSPE1P19-201ENST00000603327 295 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 AC021613.1-201ENST00000623880 111 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-309P-201ENST00000364573 106 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 SNORA80D-201ENST00000384488 135 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 MIR489-201ENST00000384923 84 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 AL603914.1-201ENST00000401964 204 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 MIR1323-201ENST00000408090 73 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 AC090844.1-201ENST00000422019 156 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 MIR8055-201ENST00000610739 97 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 MIR6717-201ENST00000622747 73 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 Z97988.1-201ENST00000637697 135 ntBASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
MBD3L4A6NDZ8 AC010332.2-201ENST00000613083 1904 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-187P-201ENST00000384139 106 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 SNORD38B-201ENST00000384690 67 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 MIR1276-201ENST00000408707 83 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-240P-201ENST00000516098 97 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 Y_RNA.692-201ENST00000516627 105 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 AP000753.3-201ENST00000604083 169 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 AC011603.4-201ENST00000611325 277 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 SEPT14P17-201ENST00000617978 177 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 SNORD38B-202ENST00000625943 69 ntBASIC1.34□□□□□ -2.19
MBD3L4A6NDZ8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-349P-201ENST00000362402 107 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-654P-201ENST00000364373 107 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 SNORA25-201ENST00000384384 134 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-997P-201ENST00000384725 107 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 Y_RNA.568-201ENST00000384742 113 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-1319P-201ENST00000390855 104 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-747P-201ENST00000390928 104 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-241P-201ENST00000391148 104 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 SNORA26.6-201ENST00000391256 115 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-177P-201ENST00000411257 104 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 MRPL35P3-201ENST00000421557 364 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 Y_RNA.651-201ENST00000459380 103 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 SNORD79.1-201ENST00000516069 84 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 RNU1-92P-201ENST00000517017 135 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 MIR6504-201ENST00000613520 61 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 AP001340.1-201ENST00000624405 217 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
MBD3L4A6NDZ8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
MBD3L4A6NDZ8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
MBD3L4A6NDZ8 RNA5SP95-201ENST00000410319 137 ntBASIC1.32□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-602P-201ENST00000411155 105 ntBASIC1.32□□□□□ -2.2
MBD3L4A6NDZ8 snoU13.18-201ENST00000459483 104 ntBASIC1.32□□□□□ -2.2
MBD3L4A6NDZ8 Y_RNA.757-201ENST00000578934 114 ntBASIC1.32□□□□□ -2.2
MBD3L4A6NDZ8 U7.2-201ENST00000607576 63 ntBASIC1.32□□□□□ -2.2
MBD3L4A6NDZ8 AC008163.1-202ENST00000636004 2889 ntBASIC1.32□□□□□ -2.2
MBD3L4A6NDZ8 SNORA22.1-201ENST00000362701 134 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 SNORA40-201ENST00000388090 126 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-205P-201ENST00000390858 107 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-613P-201ENST00000410412 108 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 RNU7-21P-201ENST00000459430 62 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-113P-201ENST00000516653 101 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 AC133485.4-201ENST00000561835 220 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 AC138907.4-201ENST00000570107 226 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 AC091895.1-201ENST00000624494 256 ntBASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MBD3L4A6NDZ8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.3□□□□□ -2.2
MBD3L4A6NDZ8 SNORA2B-201ENST00000384583 137 ntBASIC1.3□□□□□ -2.2
MBD3L4A6NDZ8 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
MBD3L4A6NDZ8 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
MBD3L4A6NDZ8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.3□□□□□ -2.2
MBD3L4A6NDZ8 RNU7-90P-201ENST00000459216 62 ntBASIC1.3□□□□□ -2.2
MBD3L4A6NDZ8 AC023827.1-201ENST00000569247 97 ntBASIC1.3□□□□□ -2.2
MBD3L4A6NDZ8 MIR4264-201ENST00000583520 66 ntBASIC1.3□□□□□ -2.2
MBD3L4A6NDZ8 MT-TN-201ENST00000387400 73 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 SNORD12-201ENST00000391002 90 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-257P-201ENST00000410238 98 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 AL022718.1-201ENST00000412004 84 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 AC063976.4-201ENST00000421971 163 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 MTND4LP9-201ENST00000427694 174 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 RNU6-893P-201ENST00000458841 100 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 RNU7-40P-201ENST00000516397 64 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 AC021443.1-201ENST00000604478 211 ntBASIC1.29□□□□□ -2.2
MBD3L4A6NDZ8 TUG1_4.1-201ENST00000619464 181 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms