Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SNORD115-9-201ENST00000362912 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-21-201ENST00000362963 81 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-14-201ENST00000363090 81 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-13-201ENST00000363358 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-41-201ENST00000363608 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-11-201ENST00000363616 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-5-201ENST00000363633 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-39-201ENST00000363694 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-4-201ENST00000363810 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-16-201ENST00000363887 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-6-201ENST00000363942 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-42-201ENST00000364273 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.272-201ENST00000364696 102 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-15-201ENST00000364809 81 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-1-201ENST00000364961 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-26-201ENST00000365067 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-10-201ENST00000365073 81 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-43-201ENST00000365503 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-36-201ENST00000365629 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD116-18-201ENST00000383961 92 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORA24-201ENST00000384096 131 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORA79-201ENST00000408376 140 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 RNU7-67P-201ENST00000459003 62 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 RPS29P24-201ENST00000486345 171 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 PDCD5P2-201ENST00000507570 312 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.662-201ENST00000516028 97 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.686-201ENST00000516548 134 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-40-201ENST00000606510 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 AC091932.4-201ENST00000623386 200 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 AL596211.1-201ENST00000569873 2277 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 RNU4-11P-201ENST00000365287 132 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.393-201ENST00000383936 102 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 RNU6-886P-201ENST00000384319 105 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 SNORA20-201ENST00000384662 132 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 SNORA40.5-201ENST00000391061 128 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 AC244023.1-201ENST00000426884 112 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 AC107027.2-201ENST00000512197 115 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 RNU6-998P-201ENST00000515894 101 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 AC242498.1-201ENST00000604134 111 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
TRIM49BA6NDI0 RNA5SP48-201ENST00000363969 126 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 RNU6-312P-201ENST00000364629 107 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.497-201ENST00000384447 98 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.537-201ENST00000384626 109 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 RNU6-460P-201ENST00000391158 108 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 SNORA26.6-201ENST00000391256 115 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 MIR548I3-201ENST00000408378 149 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 RNU6-847P-201ENST00000411115 108 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 AC087499.4-201ENST00000448505 178 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 RNU7-21P-201ENST00000459430 62 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 RNU6-255P-201ENST00000516957 105 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 MIR6515-201ENST00000619843 57 ntBASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRIM49BA6NDI0 RNU6-151P-201ENST00000364158 107 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.351-201ENST00000365436 96 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.441-201ENST00000384123 112 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 SNORD12C-201ENST00000386307 89 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 RNU6-239P-201ENST00000390990 99 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 SNORA26-201ENST00000391286 122 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 RNU6-394P-201ENST00000410735 107 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 RNA5SP127-201ENST00000411051 133 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 RNA5SP236-201ENST00000516169 116 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 RNU6-346P-201ENST00000516288 111 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 RNU6-1258P-201ENST00000516911 111 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 MIR6740-201ENST00000618268 113 ntBASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.270-201ENST00000364693 104 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.294-201ENST00000364916 102 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.542-201ENST00000384641 111 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 MIR624-201ENST00000385217 97 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 MIR942-201ENST00000401111 86 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 RNU7-121P-201ENST00000516604 62 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 AC036111.3-201ENST00000526389 112 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 MIR3144-201ENST00000579460 79 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 AC131055.1-201ENST00000584626 316 ntBASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.170-201ENST00000363746 110 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.251-201ENST00000364551 99 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 SNORA1.1-201ENST00000364671 133 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 SNORA1.2-201ENST00000365189 134 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 RNU6-602P-201ENST00000411155 105 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 AL035398.1-201ENST00000430869 322 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 RNU7-197P-201ENST00000458836 62 ntBASIC0.84□□□□□ -2.27
TRIM49BA6NDI0 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms