Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU6-648P-201ENST00000410190 107 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 AC016907.1-201ENST00000419483 435 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 HLA-S-202ENST00000425174 53 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU7-66P-201ENST00000459469 62 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 AC083798.1-201ENST00000472671 131 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 PART1_1.1-201ENST00000611761 217 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU6-226P-201ENST00000363778 107 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU6-476P-201ENST00000384726 107 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 MTND2P22-201ENST00000444325 1033 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 RNA5SP180-201ENST00000516181 101 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 snoU83B.1-201ENST00000517136 88 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 DEFB117-201ENST00000602356 141 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 AL049861.1-201ENST00000603130 150 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 AC018645.2-201ENST00000609151 472 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 AC011476.5-201ENST00000615594 130 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 AC091932.4-201ENST00000623386 200 ntBASIC-1.53□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-905P-201ENST00000384434 107 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 SNORD115-47-201ENST00000391226 86 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 AL353813.1-201ENST00000440700 253 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 SNORD5.1-201ENST00000458800 75 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU7-80P-201ENST00000459562 61 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-835P-201ENST00000516974 104 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 AL121655.1-201ENST00000605811 308 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 AC021613.1-201ENST00000623880 111 ntBASIC-1.54□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 SNORD81.1-201ENST00000363064 77 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-801P-201ENST00000364087 105 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 SNORA72.4-201ENST00000384174 132 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 SNX3P1X-201ENST00000414887 175 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 AC024067.1-201ENST00000426199 223 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 MTND1P2-201ENST00000430604 821 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-365P-201ENST00000517113 106 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 RN7SKP295-201ENST00000517264 153 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 MTATP6P24-201ENST00000576835 677 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 AC093783.1-201ENST00000612976 329 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 AC112487.2-201ENST00000637950 304 ntBASIC-1.55□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-524P-201ENST00000384270 107 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 RNY3P10-201ENST00000384764 102 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU7-195P-201ENST00000458793 62 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU7-137P-201ENST00000516788 62 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 AC007012.1-201ENST00000567192 175 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 MIR376A2-201ENST00000636782 80 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 AC099654.14-201ENST00000638599 341 ntBASIC-1.56□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.57□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.57□□□□□ -2.66
TRAV1-2A0A0B4J238 MTND4P28-201ENST00000426217 387 ntBASIC-1.57□□□□□ -2.66
TRAV1-2A0A0B4J238 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.57□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-158P-201ENST00000517104 100 ntBASIC-1.57□□□□□ -2.66
TRAV1-2A0A0B4J238 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.57□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-144P-201ENST00000383951 107 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU4-70P-201ENST00000384579 139 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 MIR548I2-201ENST00000408348 149 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-126P-201ENST00000516685 103 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 MRPS36P3-201ENST00000519284 130 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 AC024909.2-201ENST00000553035 286 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 AC138207.3-201ENST00000585289 166 ntBASIC-1.58□□□□□ -2.66
TRAV1-2A0A0B4J238 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 SNORA53-201ENST00000391141 249 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 MIR8485-201ENST00000401372 91 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 MIR1285-2-201ENST00000408311 88 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 RNU6-383P-201ENST00000410864 94 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 MIR2113-201ENST00000459007 91 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 SNORD2-201ENST00000459163 69 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 AC060788.1-201ENST00000521318 469 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 AL359881.1-201ENST00000602916 267 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 AL008718.3-201ENST00000610217 321 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 MIR1246-201ENST00000636535 73 ntBASIC-1.59□□□□□ -2.66
TRAV1-2A0A0B4J238 SNORD114-10-201ENST00000363409 72 ntBASIC-1.6□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-571P-201ENST00000384128 107 ntBASIC-1.6□□□□□ -2.67
TRAV1-2A0A0B4J238 SNORD63B-201ENST00000411005 70 ntBASIC-1.6□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-893P-201ENST00000458841 100 ntBASIC-1.6□□□□□ -2.67
TRAV1-2A0A0B4J238 SNORD18.2-201ENST00000459604 70 ntBASIC-1.6□□□□□ -2.67
TRAV1-2A0A0B4J238 AL442663.2-201ENST00000554385 511 ntBASIC-1.6□□□□□ -2.67
TRAV1-2A0A0B4J238 AC145350.1-201ENST00000567426 208 ntBASIC-1.6□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms