Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SNORD58A-201ENST00000383875 65 ntBASIC2.64□□□□□ -1.99
GPC6Q9Y625 MIR520C-201ENST00000385005 87 ntBASIC2.64□□□□□ -1.99
GPC6Q9Y625 AL023284.1-201ENST00000403956 276 ntBASIC2.64□□□□□ -1.99
GPC6Q9Y625 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.64□□□□□ -1.99
GPC6Q9Y625 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.64□□□□□ -1.99
GPC6Q9Y625 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
GPC6Q9Y625 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
GPC6Q9Y625 SNORD38.1-201ENST00000363863 68 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 RPL31P63-201ENST00000422565 375 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 AC003982.1-202ENST00000469928 248 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.63□□□□□ -1.99
GPC6Q9Y625 SNORA9.3-201ENST00000516383 129 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 SNORA31.11-201ENST00000516528 139 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 MIR4764-201ENST00000580680 88 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 MIR4439-201ENST00000583746 80 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 SNORD14A-201ENST00000606526 91 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 SEPT14P17-201ENST00000617978 177 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 MIR8065-201ENST00000620577 100 ntBASIC2.63□□□□□ -1.99
GPC6Q9Y625 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
GPC6Q9Y625 Y_RNA.140-201ENST00000363474 103 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 Y_RNA.609-201ENST00000410669 89 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 Y_RNA.620-201ENST00000411009 88 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 SPINT5P-201ENST00000448174 155 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 RNU7-79P-201ENST00000516082 62 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 RNU7-43P-201ENST00000516554 64 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 RNU7-35P-201ENST00000517174 62 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 DEFB122-202ENST00000569013 197 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
GPC6Q9Y625 MIR8055-201ENST00000610739 97 ntBASIC2.62□□□□□ -1.99
GPC6Q9Y625 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
GPC6Q9Y625 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
GPC6Q9Y625 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
GPC6Q9Y625 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
GPC6Q9Y625 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.61□□□□□ -1.99
GPC6Q9Y625 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 RNU6-1163P-201ENST00000364516 107 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 Y_RNA.313-201ENST00000365095 103 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 RNU1-51P-201ENST00000365345 176 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 RNU6-979P-201ENST00000383896 107 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 RNU6-602P-201ENST00000411155 105 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 EEF1A1P41-201ENST00000414667 207 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 AC027119.1-201ENST00000440877 241 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 RNU6-917P-201ENST00000516294 104 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 SNORA31.17-201ENST00000516953 127 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 U1.36-201ENST00000620684 176 ntBASIC2.61□□□□□ -1.99
GPC6Q9Y625 Y_RNA.4-201ENST00000362333 112 ntBASIC2.6□□□□□ -1.99
GPC6Q9Y625 Y_RNA.244-201ENST00000364484 109 ntBASIC2.6□□□□□ -1.99
GPC6Q9Y625 RNU6-1321P-201ENST00000390905 107 ntBASIC2.6□□□□□ -1.99
GPC6Q9Y625 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.6□□□□□ -1.99
GPC6Q9Y625 RNU6-1006P-201ENST00000516998 103 ntBASIC2.6□□□□□ -1.99
GPC6Q9Y625 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
GPC6Q9Y625 RNA5SP138-201ENST00000365098 114 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 Y_RNA.426-201ENST00000384068 113 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 SNORA44-201ENST00000384584 132 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 AL445685.2-201ENST00000422551 342 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 AL139132.1-201ENST00000431587 344 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 MTND5P40-201ENST00000559945 246 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 MIR548AO-201ENST00000579992 96 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 MIR5194-201ENST00000582634 120 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 AC006023.1-201ENST00000603944 259 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 Z97988.1-201ENST00000637697 135 ntBASIC2.59□□□□□ -1.99
GPC6Q9Y625 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.59□□□□□ -1.99
GPC6Q9Y625 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.59□□□□□ -1.99
GPC6Q9Y625 RNU6-787P-201ENST00000384032 107 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 Y_RNA.567-201ENST00000384736 106 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 MIR548G-201ENST00000408442 89 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 RNA5SP100-201ENST00000410903 110 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 RNA5SP59-201ENST00000410922 110 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 SCARNA15.3-201ENST00000626315 122 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 MIR4251-201ENST00000635819 61 ntBASIC2.58□□□□□ -2
GPC6Q9Y625 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
GPC6Q9Y625 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
GPC6Q9Y625 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
GPC6Q9Y625 RNU6-203P-201ENST00000384038 104 ntBASIC2.57□□□□□ -2
GPC6Q9Y625 RNA5SP237-201ENST00000410414 113 ntBASIC2.57□□□□□ -2
GPC6Q9Y625 RNU1-98P-201ENST00000458992 160 ntBASIC2.57□□□□□ -2
GPC6Q9Y625 RNA5SP82-201ENST00000516707 92 ntBASIC2.57□□□□□ -2
GPC6Q9Y625 RNU7-137P-201ENST00000516788 62 ntBASIC2.57□□□□□ -2
GPC6Q9Y625 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.57□□□□□ -2
GPC6Q9Y625 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.57□□□□□ -2
GPC6Q9Y625 RNU6-90P-201ENST00000606352 106 ntBASIC2.57□□□□□ -2
GPC6Q9Y625 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.57□□□□□ -2
GPC6Q9Y625 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
GPC6Q9Y625 AC019129.1-201ENST00000403786 261 ntBASIC2.56□□□□□ -2
GPC6Q9Y625 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.56□□□□□ -2
GPC6Q9Y625 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.56□□□□□ -2
GPC6Q9Y625 RNA5SP450-201ENST00000411206 102 ntBASIC2.56□□□□□ -2
GPC6Q9Y625 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.56□□□□□ -2
GPC6Q9Y625 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.56□□□□□ -2
GPC6Q9Y625 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
GPC6Q9Y625 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms