Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 RNU6-346P-201ENST00000516288 111 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 AP003716.2-201ENST00000528260 108 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 AC112693.2-201ENST00000556538 232 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 AC131055.1-201ENST00000584626 316 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 MIR4791-201ENST00000607666 84 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 MTND1P7-201ENST00000632801 297 ntBASIC1.29□□□□□ -2.2
SNX9Q9Y5X1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 Y_RNA.52-201ENST00000362760 96 ntBASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 MIR569-201ENST00000385228 96 ntBASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 RNA5SP236-201ENST00000516169 116 ntBASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 AL357312.1-201ENST00000603879 298 ntBASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 AC008133.2-201ENST00000624540 351 ntBASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
SNX9Q9Y5X1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 SNORA25.9-201ENST00000365087 128 ntBASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 MIR1302-7-201ENST00000408841 72 ntBASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 RNU6-1149P-201ENST00000516810 97 ntBASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 AC243994.1-201ENST00000618627 109 ntBASIC1.27□□□□□ -2.21
SNX9Q9Y5X1 MTND5P32-201ENST00000560711 1802 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 RNU6-746P-201ENST00000384112 109 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 SNORD37.2-201ENST00000391075 66 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 RPS29P24-201ENST00000486345 171 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 AL133373.1-201ENST00000497098 94 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 RNU6-998P-201ENST00000515894 101 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 SNORD111.1-201ENST00000516421 86 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 MIR548X2-201ENST00000579776 100 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.26□□□□□ -2.21
SNX9Q9Y5X1 RNU6-508P-201ENST00000363231 103 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 RNU6-774P-201ENST00000363238 107 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.351-201ENST00000365436 96 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 RNU6-913P-201ENST00000390913 95 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 AC107297.1-201ENST00000459991 176 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 RNU6-947P-201ENST00000516264 106 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 MIR3133-201ENST00000583157 78 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 MIR8055-201ENST00000610739 97 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 MIR8065-201ENST00000620577 100 ntBASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SNX9Q9Y5X1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 MIR499A-201ENST00000384903 122 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.584-201ENST00000391090 114 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 RNU6-460P-201ENST00000391158 108 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 AL035398.1-201ENST00000430869 322 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 AL392103.1-201ENST00000447000 198 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 RNU7-73P-201ENST00000458743 63 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 RNU7-96P-201ENST00000459535 64 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 RNA5SP272-201ENST00000516095 111 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.686-201ENST00000516548 134 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 RNU6-958P-201ENST00000516995 106 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 MIR548AO-201ENST00000579992 96 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 MIR4251-201ENST00000635819 61 ntBASIC1.24□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.120-201ENST00000363304 110 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 SNORA51.10-201ENST00000384418 136 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 SUMO1P3-201ENST00000439961 304 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 SNORA25.12-201ENST00000516202 82 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 RN7SKP88-201ENST00000516847 250 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 7SK.8-201ENST00000612110 250 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 7SK.11-201ENST00000615477 250 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 7SK.13-201ENST00000622040 250 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 AC091932.4-201ENST00000623386 200 ntBASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SNX9Q9Y5X1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 RNU6-309P-201ENST00000364573 106 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 SNORA70.7-201ENST00000384159 133 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.488-201ENST00000384403 102 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.568-201ENST00000384742 113 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 MIR1185-1-201ENST00000408598 86 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 AC245047.7-201ENST00000440265 293 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 RNU7-67P-201ENST00000459003 62 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 RNU2-11P-201ENST00000459191 187 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.651-201ENST00000459380 103 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 RNU6-426P-201ENST00000516464 97 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 Y_RNA.703-201ENST00000516846 111 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 AP001340.1-201ENST00000624405 217 ntBASIC1.22□□□□□ -2.21
SNX9Q9Y5X1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 SNORA25.3-201ENST00000363205 127 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 RNU6-187P-201ENST00000384139 106 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 SNORA26.6-201ENST00000391256 115 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 259.1 ms