Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.82□□□□□ -1.96
CHMP3Q9Y3E7 RNA5SP173-201ENST00000364857 136 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 SNORA24-201ENST00000384096 131 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 MIR660-201ENST00000385235 97 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-679P-201ENST00000391003 106 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 Y_RNA.601-201ENST00000410500 113 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 HMGN1P33-201ENST00000432945 451 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-893P-201ENST00000458841 100 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 snoU13.27-201ENST00000459278 104 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 MIR1273D-201ENST00000577266 86 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 MIR4648-201ENST00000580107 72 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 MIR6766-201ENST00000622641 72 ntBASIC2.81□□□□□ -1.96
CHMP3Q9Y3E7 SNORD115-2-201ENST00000362842 82 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-832P-201ENST00000363319 107 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 Y_RNA.290-201ENST00000364879 114 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 SNORD115-20-201ENST00000365099 82 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 SNORA32-201ENST00000384072 121 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 MIR144-201ENST00000384886 86 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 RNU7-53P-201ENST00000516705 60 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 AL020996.3-201ENST00000606617 222 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 AC243994.1-201ENST00000618627 109 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 AL513423.1-201ENST00000621695 132 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 MIR6717-201ENST00000622747 73 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 SNORD3E-202ENST00000627253 216 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 AC091304.10-201ENST00000641554 121 ntBASIC2.8□□□□□ -1.96
CHMP3Q9Y3E7 Y_RNA.299-201ENST00000364973 94 ntBASIC2.79□□□□□ -1.96
CHMP3Q9Y3E7 SNORA70.7-201ENST00000384159 133 ntBASIC2.79□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-644P-201ENST00000391155 98 ntBASIC2.79□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-592P-201ENST00000411333 103 ntBASIC2.79□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-162P-201ENST00000516228 103 ntBASIC2.79□□□□□ -1.96
CHMP3Q9Y3E7 AC026421.1-201ENST00000519101 163 ntBASIC2.79□□□□□ -1.96
CHMP3Q9Y3E7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.79□□□□□ -1.96
CHMP3Q9Y3E7 MIR494-201ENST00000349529 81 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-170P-201ENST00000362832 104 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-457P-201ENST00000363999 107 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 RNU6-1134P-201ENST00000365156 101 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 MIR3152-201ENST00000579801 74 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 FAM106DP-201ENST00000586416 501 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 FAM71BP1-201ENST00000604431 523 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 MIR6895-201ENST00000613497 78 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 MIR6715A-201ENST00000615929 79 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 AP000648.3-201ENST00000623539 4507 ntBASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
CHMP3Q9Y3E7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHMP3Q9Y3E7 RNU6-573P-201ENST00000383938 106 ntBASIC2.77□□□□□ -1.97
CHMP3Q9Y3E7 RN7SKP12-201ENST00000516275 143 ntBASIC2.77□□□□□ -1.97
CHMP3Q9Y3E7 RNA5SP402-201ENST00000517148 110 ntBASIC2.77□□□□□ -1.97
CHMP3Q9Y3E7 MIR3124-201ENST00000582636 67 ntBASIC2.77□□□□□ -1.97
CHMP3Q9Y3E7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.77□□□□□ -1.97
CHMP3Q9Y3E7 RNY1P10-201ENST00000363268 113 ntBASIC2.76□□□□□ -1.97
CHMP3Q9Y3E7 RNU7-73P-201ENST00000458743 63 ntBASIC2.76□□□□□ -1.97
CHMP3Q9Y3E7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.76□□□□□ -1.97
CHMP3Q9Y3E7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.76□□□□□ -1.97
CHMP3Q9Y3E7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.76□□□□□ -1.97
CHMP3Q9Y3E7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 SNORA67.3-201ENST00000384366 140 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 SNORA64-201ENST00000384674 134 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 RNA5SP100-201ENST00000410903 110 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 RNA5SP59-201ENST00000410922 110 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 RNA5SP270-201ENST00000411361 118 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 AC004941.2-201ENST00000427009 228 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 RNU6-521P-201ENST00000516663 105 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 U7.3-201ENST00000616123 62 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 MIR1245B-201ENST00000636115 69 ntBASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP3Q9Y3E7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHMP3Q9Y3E7 SNORD77B-201ENST00000391112 67 ntBASIC2.74□□□□□ -1.97
CHMP3Q9Y3E7 Y_RNA.593-201ENST00000410292 98 ntBASIC2.74□□□□□ -1.97
CHMP3Q9Y3E7 snoU13.26-201ENST00000459452 105 ntBASIC2.74□□□□□ -1.97
CHMP3Q9Y3E7 SNORA31.17-201ENST00000516953 127 ntBASIC2.74□□□□□ -1.97
CHMP3Q9Y3E7 AC104984.5-201ENST00000586878 94 ntBASIC2.74□□□□□ -1.97
CHMP3Q9Y3E7 Y_RNA.10-201ENST00000362371 110 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 RNU6-1201P-201ENST00000384227 107 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 RNU6-342P-201ENST00000384521 104 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 MIR450A2-201ENST00000385022 100 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 AL023284.1-201ENST00000403956 276 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 RNA5SP450-201ENST00000411206 102 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 RPL23AP6-201ENST00000446637 472 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 RNA5SP481-201ENST00000516814 122 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 MIR4777-201ENST00000583710 86 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 MIR6132-201ENST00000622083 109 ntBASIC2.73□□□□□ -1.97
CHMP3Q9Y3E7 MIR424-201ENST00000362227 98 ntBASIC2.72□□□□□ -1.97
CHMP3Q9Y3E7 SNORD23.1-201ENST00000408212 104 ntBASIC2.72□□□□□ -1.97
CHMP3Q9Y3E7 RNA5SP82-201ENST00000516707 92 ntBASIC2.72□□□□□ -1.97
CHMP3Q9Y3E7 AC022254.1-201ENST00000567857 235 ntBASIC2.72□□□□□ -1.97
CHMP3Q9Y3E7 AP006437.1-201ENST00000641440 3685 ntBASIC2.72□□□□□ -1.97
CHMP3Q9Y3E7 Y_RNA.17-201ENST00000362433 111 ntBASIC2.71□□□□□ -1.98
CHMP3Q9Y3E7 BTF3P4-201ENST00000418852 495 ntBASIC2.71□□□□□ -1.98
CHMP3Q9Y3E7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.71□□□□□ -1.98
CHMP3Q9Y3E7 RNU6-917P-201ENST00000516294 104 ntBASIC2.71□□□□□ -1.98
CHMP3Q9Y3E7 RNU7-193P-201ENST00000516723 65 ntBASIC2.71□□□□□ -1.98
CHMP3Q9Y3E7 SNORA74.3-201ENST00000517108 154 ntBASIC2.71□□□□□ -1.98
CHMP3Q9Y3E7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 246.1 ms