Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 Y_RNA.82-201ENST00000363000 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.92-201ENST00000363043 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.145-201ENST00000363527 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.199-201ENST00000364014 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.235-201ENST00000364412 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.306-201ENST00000365015 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.312-201ENST00000365089 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.322-201ENST00000365151 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 SNORA27-201ENST00000384323 126 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-1228P-201ENST00000391014 107 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-651P-201ENST00000411040 105 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 AC090844.1-201ENST00000422019 156 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 AC015818.7-201ENST00000428754 109 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 AC087499.7-201ENST00000441958 109 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.650-201ENST00000459002 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 RNA5SP153-201ENST00000516498 76 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.777-201ENST00000516982 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 AC007751.1-201ENST00000529260 376 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 MIR4264-201ENST00000583520 66 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.771-201ENST00000598668 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 AP000942.4-201ENST00000604811 241 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 AP001282.2-201ENST00000616149 309 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 MIR2909-201ENST00000617113 69 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.789-201ENST00000622480 102 ntBASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.37-201ENST00000362606 108 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-888P-201ENST00000363010 101 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 SNORD38B-201ENST00000384690 67 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.574-201ENST00000384766 95 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 MIR606-201ENST00000384851 96 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 MTATP8P1-201ENST00000467115 207 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-1270P-201ENST00000517128 108 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 SNORD38B-202ENST00000625943 69 ntBASIC0.63□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.326-201ENST00000365176 113 ntBASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 SNORA24-201ENST00000384096 131 ntBASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 SNORD61-201ENST00000384252 73 ntBASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-205P-201ENST00000390858 107 ntBASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 RNU7-73P-201ENST00000458743 63 ntBASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 RPS29P24-201ENST00000486345 171 ntBASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 AC008737.2-201ENST00000599446 118 ntBASIC0.62□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.149-201ENST00000363558 117 ntBASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 SNORD45.3-201ENST00000363836 72 ntBASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.352-201ENST00000365439 102 ntBASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 MIR616-201ENST00000385293 97 ntBASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 AL606845.1-201ENST00000404881 255 ntBASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.622-201ENST00000411091 108 ntBASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 SNORD2.1-201ENST00000458762 69 ntBASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.61□□□□□ -2.31
RPH3AQ9Y2J0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 MIR302B-201ENST00000362188 73 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.262-201ENST00000364641 102 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.634-201ENST00000364811 113 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.294-201ENST00000364916 102 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-728P-201ENST00000365375 104 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-1189P-201ENST00000383958 107 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.459-201ENST00000384251 102 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-125P-201ENST00000384505 107 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 MIR518F-201ENST00000384973 87 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 MIR1302-3-201ENST00000408128 138 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 MIR1827-201ENST00000408549 66 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 RNA5SP261-201ENST00000410536 106 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 RNU7-96P-201ENST00000459535 64 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 SNORA18.4-201ENST00000516440 124 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 uc_338.6-201ENST00000613544 171 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 MIR6086-201ENST00000638065 55 ntBASIC0.6□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.54-201ENST00000362766 105 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-103P-201ENST00000363686 107 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 SNORA1.1-201ENST00000364671 133 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.280-201ENST00000364765 112 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.304-201ENST00000365011 112 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-934P-201ENST00000365154 107 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 RNU4-17P-201ENST00000365598 141 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 MIR548A2-201ENST00000384956 97 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 SNORD105-201ENST00000386910 85 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 MT-TT-201ENST00000387460 66 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 SNORD77.3-201ENST00000391113 65 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 MIR548H3-201ENST00000408771 118 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-977P-201ENST00000516411 103 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 Z83818.1-201ENST00000603584 150 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 AL365265.1-201ENST00000621045 234 ntBASIC0.59□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-369P-201ENST00000362515 102 ntBASIC0.58□□□□□ -2.32
RPH3AQ9Y2J0 Y_RNA.274-201ENST00000364714 101 ntBASIC0.58□□□□□ -2.32
RPH3AQ9Y2J0 Y_RNA.288-201ENST00000364854 92 ntBASIC0.58□□□□□ -2.32
RPH3AQ9Y2J0 RNU6-580P-201ENST00000365159 107 ntBASIC0.58□□□□□ -2.32
RPH3AQ9Y2J0 RNY1P8-201ENST00000383970 114 ntBASIC0.58□□□□□ -2.32
RPH3AQ9Y2J0 Y_RNA.556-201ENST00000384677 113 ntBASIC0.58□□□□□ -2.32
RPH3AQ9Y2J0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
RPH3AQ9Y2J0 RNU6-938P-201ENST00000411285 103 ntBASIC0.58□□□□□ -2.32
RPH3AQ9Y2J0 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms