Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MIR548Z-201ENST00000584743 97 ntBASIC2.55□□□□□ -2
FNDC3AQ9Y2H6 AC012531.4-201ENST00000616509 177 ntBASIC2.55□□□□□ -2
FNDC3AQ9Y2H6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
FNDC3AQ9Y2H6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 Y_RNA.466-201ENST00000384294 113 ntBASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 RNU4-53P-201ENST00000410828 140 ntBASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 Z98742.3-201ENST00000418637 326 ntBASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 snoU13.16-201ENST00000459350 104 ntBASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 snoU13.15-201ENST00000459407 104 ntBASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 MIR4524B-201ENST00000581569 115 ntBASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 MIR8055-201ENST00000610739 97 ntBASIC2.54□□□□□ -2
FNDC3AQ9Y2H6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 Y_RNA.10-201ENST00000362371 110 ntBASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 SNORD114-30-201ENST00000364448 72 ntBASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 SNORA1.1-201ENST00000364671 133 ntBASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 RNU7-61P-201ENST00000515897 61 ntBASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 MIR4764-201ENST00000580680 88 ntBASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
FNDC3AQ9Y2H6 RNA5SP276-201ENST00000362580 94 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-342P-201ENST00000384521 104 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 MIR520C-201ENST00000385005 87 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-644P-201ENST00000391155 98 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 AC245047.7-201ENST00000440265 293 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 DEFB122-202ENST00000569013 197 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 AC008133.2-201ENST00000624540 351 ntBASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-170P-201ENST00000362832 104 ntBASIC2.51□□□□□ -2.01
FNDC3AQ9Y2H6 MIR27B-201ENST00000385129 97 ntBASIC2.51□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-162P-201ENST00000516228 103 ntBASIC2.51□□□□□ -2.01
FNDC3AQ9Y2H6 RNU7-43P-201ENST00000516554 64 ntBASIC2.51□□□□□ -2.01
FNDC3AQ9Y2H6 AC062037.1-201ENST00000605302 128 ntBASIC2.51□□□□□ -2.01
FNDC3AQ9Y2H6 AL512310.12-203ENST00000640543 90 ntBASIC2.51□□□□□ -2.01
FNDC3AQ9Y2H6 AC091304.10-201ENST00000641554 121 ntBASIC2.51□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-1123P-201ENST00000362347 106 ntBASIC2.5□□□□□ -2.01
FNDC3AQ9Y2H6 AC004965.1-201ENST00000413033 213 ntBASIC2.5□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
FNDC3AQ9Y2H6 RNU2-19P-201ENST00000517288 84 ntBASIC2.5□□□□□ -2.01
FNDC3AQ9Y2H6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.5□□□□□ -2.01
FNDC3AQ9Y2H6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FNDC3AQ9Y2H6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 Y_RNA.290-201ENST00000364879 114 ntBASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 MIR194-1-201ENST00000384892 85 ntBASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 RNA5SP425-201ENST00000410336 112 ntBASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 MIR3670-2-201ENST00000582974 65 ntBASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 MIR3670-1-201ENST00000584160 65 ntBASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 MIR3670-3-201ENST00000584855 65 ntBASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 MIR3670-4-201ENST00000612260 65 ntBASIC2.49□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-1201P-201ENST00000384227 107 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 SNORA18-201ENST00000384416 132 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 RN7SKP223-201ENST00000410582 62 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 AC004941.2-201ENST00000427009 228 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 AC055731.1-201ENST00000474387 401 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 Y_RNA.659-201ENST00000515994 113 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 AC026421.1-201ENST00000519101 163 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 MIR548AO-201ENST00000579992 96 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 MIR5194-201ENST00000582634 120 ntBASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-1134P-201ENST00000365156 101 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 RNU6-602P-201ENST00000411155 105 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 AC090844.1-201ENST00000422019 156 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 SNORA31.15-201ENST00000516771 132 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 MIR4648-201ENST00000580107 72 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 MIR5092-201ENST00000583139 88 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 MIR4777-201ENST00000583710 86 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 MIR8065-201ENST00000620577 100 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 AC005336.3-201ENST00000623833 2679 ntBASIC2.47□□□□□ -2.01
FNDC3AQ9Y2H6 RNA5SP259-201ENST00000365541 109 ntBASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 RNU6-439P-201ENST00000384188 106 ntBASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 RNU7-41P-201ENST00000515917 61 ntBASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 RNU6-1018P-201ENST00000516577 106 ntBASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 U7.3-201ENST00000616123 62 ntBASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 AC010297.1-201ENST00000623948 149 ntBASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 Z97988.1-201ENST00000637697 135 ntBASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
FNDC3AQ9Y2H6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
FNDC3AQ9Y2H6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.45□□□□□ -2.02
FNDC3AQ9Y2H6 RNU6-60P-201ENST00000364792 103 ntBASIC2.45□□□□□ -2.02
FNDC3AQ9Y2H6 SNORD115-35-201ENST00000365122 82 ntBASIC2.45□□□□□ -2.02
FNDC3AQ9Y2H6 SNORA6-201ENST00000384033 151 ntBASIC2.45□□□□□ -2.02
FNDC3AQ9Y2H6 SNORD23.1-201ENST00000408212 104 ntBASIC2.45□□□□□ -2.02
FNDC3AQ9Y2H6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.45□□□□□ -2.02
FNDC3AQ9Y2H6 MIR4251-201ENST00000635819 61 ntBASIC2.45□□□□□ -2.02
FNDC3AQ9Y2H6 SNORD45B-201ENST00000364617 72 ntBASIC2.44□□□□□ -2.02
FNDC3AQ9Y2H6 Y_RNA.467-201ENST00000384297 102 ntBASIC2.44□□□□□ -2.02
FNDC3AQ9Y2H6 RNU6-1237P-201ENST00000384777 107 ntBASIC2.44□□□□□ -2.02
FNDC3AQ9Y2H6 MIR653-201ENST00000385279 96 ntBASIC2.44□□□□□ -2.02
FNDC3AQ9Y2H6 RNU6-1307P-201ENST00000391012 103 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms