Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC245884.12-201ENST00000615364 59 ntBASIC2.75□□□□□ -1.97
NOD1Q9Y239 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 SUMO1P4-201ENST00000429430 302 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.74□□□□□ -1.97
NOD1Q9Y239 AC011753.1-201ENST00000451001 220 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 snoU13.15-201ENST00000459407 104 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 RNU6-795P-201ENST00000516323 103 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 RNU6-521P-201ENST00000516663 105 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 MIR8055-201ENST00000610739 97 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 AC008133.2-201ENST00000624540 351 ntBASIC2.74□□□□□ -1.97
NOD1Q9Y239 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
NOD1Q9Y239 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NOD1Q9Y239 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
NOD1Q9Y239 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
NOD1Q9Y239 AL023284.1-201ENST00000403956 276 ntBASIC2.73□□□□□ -1.97
NOD1Q9Y239 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.73□□□□□ -1.97
NOD1Q9Y239 AL356320.1-201ENST00000429616 163 ntBASIC2.73□□□□□ -1.97
NOD1Q9Y239 RNU6-237P-201ENST00000515985 71 ntBASIC2.73□□□□□ -1.97
NOD1Q9Y239 MIR4764-201ENST00000580680 88 ntBASIC2.73□□□□□ -1.97
NOD1Q9Y239 AC012531.4-201ENST00000616509 177 ntBASIC2.73□□□□□ -1.97
NOD1Q9Y239 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.73□□□□□ -1.97
NOD1Q9Y239 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
NOD1Q9Y239 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.72□□□□□ -1.97
NOD1Q9Y239 Y_RNA.388-201ENST00000383919 113 ntBASIC2.72□□□□□ -1.97
NOD1Q9Y239 MIR520C-201ENST00000385005 87 ntBASIC2.72□□□□□ -1.97
NOD1Q9Y239 RN7SKP223-201ENST00000410582 62 ntBASIC2.72□□□□□ -1.97
NOD1Q9Y239 RNA5SP344-201ENST00000411081 104 ntBASIC2.72□□□□□ -1.97
NOD1Q9Y239 DEFB122-202ENST00000569013 197 ntBASIC2.72□□□□□ -1.97
NOD1Q9Y239 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NOD1Q9Y239 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.97
NOD1Q9Y239 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
NOD1Q9Y239 RNU6-170P-201ENST00000362832 104 ntBASIC2.71□□□□□ -1.98
NOD1Q9Y239 SNORA18-201ENST00000384416 132 ntBASIC2.71□□□□□ -1.98
NOD1Q9Y239 RNU7-61P-201ENST00000515897 61 ntBASIC2.71□□□□□ -1.98
NOD1Q9Y239 RNU6-1018P-201ENST00000516577 106 ntBASIC2.71□□□□□ -1.98
NOD1Q9Y239 RNU2-19P-201ENST00000517288 84 ntBASIC2.71□□□□□ -1.98
NOD1Q9Y239 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.71□□□□□ -1.98
NOD1Q9Y239 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.71□□□□□ -1.98
NOD1Q9Y239 AL512310.12-203ENST00000640543 90 ntBASIC2.71□□□□□ -1.98
NOD1Q9Y239 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOD1Q9Y239 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NOD1Q9Y239 AC005336.3-201ENST00000623833 2679 ntBASIC2.7□□□□□ -1.98
NOD1Q9Y239 AC004941.2-201ENST00000427009 228 ntBASIC2.7□□□□□ -1.98
NOD1Q9Y239 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NOD1Q9Y239 AC245047.7-201ENST00000440265 293 ntBASIC2.7□□□□□ -1.98
NOD1Q9Y239 MIR6873-201ENST00000622788 63 ntBASIC2.7□□□□□ -1.98
NOD1Q9Y239 SNORA67.1-201ENST00000364749 141 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 Y_RNA.354-201ENST00000365448 111 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 RNU6-1201P-201ENST00000384227 107 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 RNU6-342P-201ENST00000384521 104 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 RNU6-644P-201ENST00000391155 98 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 SNORD23.1-201ENST00000408212 104 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 AC004965.1-201ENST00000413033 213 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 AC026421.1-201ENST00000519101 163 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.69□□□□□ -1.98
NOD1Q9Y239 MIR4769-201ENST00000584126 77 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 Z97988.1-201ENST00000637697 135 ntBASIC2.69□□□□□ -1.98
NOD1Q9Y239 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NOD1Q9Y239 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
NOD1Q9Y239 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
NOD1Q9Y239 SNORD45B-201ENST00000364617 72 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 Y_RNA.377-201ENST00000365644 108 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 MIR194-1-201ENST00000384892 85 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 AC096949.1-201ENST00000412047 152 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 MIR1273D-201ENST00000577266 86 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 AC024614.2-201ENST00000577584 372 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 MIR5092-201ENST00000583139 88 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 MIR548Z-201ENST00000584743 97 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 AC062037.1-201ENST00000605302 128 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 AC046143.2-201ENST00000609789 160 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 MIR8065-201ENST00000620577 100 ntBASIC2.68□□□□□ -1.98
NOD1Q9Y239 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NOD1Q9Y239 RNA5SP456-201ENST00000364002 114 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 Y_RNA.290-201ENST00000364879 114 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 RNU6-1134P-201ENST00000365156 101 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 AC055731.1-201ENST00000474387 401 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 Y_RNA.659-201ENST00000515994 113 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 RNU6-322P-201ENST00000516010 103 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 SNORA31.15-201ENST00000516771 132 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 AC091304.10-201ENST00000641554 121 ntBASIC2.67□□□□□ -1.98
NOD1Q9Y239 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NOD1Q9Y239 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.67□□□□□ -1.98
NOD1Q9Y239 RNA5SP276-201ENST00000362580 94 ntBASIC2.66□□□□□ -1.98
NOD1Q9Y239 SNORD115-35-201ENST00000365122 82 ntBASIC2.66□□□□□ -1.98
NOD1Q9Y239 RNU6-602P-201ENST00000411155 105 ntBASIC2.66□□□□□ -1.98
NOD1Q9Y239 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.66□□□□□ -1.98
NOD1Q9Y239 AC026436.1-201ENST00000510537 270 ntBASIC2.66□□□□□ -1.98
NOD1Q9Y239 CYP3A52P-201ENST00000563326 91 ntBASIC2.66□□□□□ -1.98
NOD1Q9Y239 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.66□□□□□ -1.98
NOD1Q9Y239 MIR1291-201ENST00000627649 87 ntBASIC2.66□□□□□ -1.98
NOD1Q9Y239 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
NOD1Q9Y239 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
NOD1Q9Y239 RNU6-1313P-201ENST00000362622 102 ntBASIC2.65□□□□□ -1.99
NOD1Q9Y239 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.99
NOD1Q9Y239 RNU6-60P-201ENST00000364792 103 ntBASIC2.65□□□□□ -1.99
NOD1Q9Y239 MIR450A2-201ENST00000385022 100 ntBASIC2.65□□□□□ -1.99
NOD1Q9Y239 MIR653-201ENST00000385279 96 ntBASIC2.65□□□□□ -1.99
NOD1Q9Y239 RNU7-2P-201ENST00000516096 62 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms