Protein–RNA interactions for Protein: Q9Y228

TRAF3IP3, TRAF3-interacting JNK-activating modulator, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3Q9Y228 AC006006.1-201ENST00000603082 144 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 AC037487.3-201ENST00000606668 112 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 AP001282.2-201ENST00000616149 309 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 snoU2_19.4-201ENST00000364329 80 ntBASIC0.31□□□□□ -2.36
TRAF3IP3Q9Y228 RNU5E-4P-201ENST00000364931 120 ntBASIC0.31□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-867P-201ENST00000364956 107 ntBASIC0.31□□□□□ -2.36
TRAF3IP3Q9Y228 SNORD77.3-201ENST00000391113 65 ntBASIC0.31□□□□□ -2.36
TRAF3IP3Q9Y228 RNU7-185P-201ENST00000459215 60 ntBASIC0.31□□□□□ -2.36
TRAF3IP3Q9Y228 RNU7-96P-201ENST00000459535 64 ntBASIC0.31□□□□□ -2.36
TRAF3IP3Q9Y228 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
TRAF3IP3Q9Y228 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1309P-201ENST00000363305 108 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 SNORA1.1-201ENST00000364671 133 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-740P-201ENST00000364734 105 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.410-201ENST00000383992 113 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 MIR548I3-201ENST00000408378 149 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-985P-201ENST00000410182 104 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 AL138752.1-201ENST00000452964 351 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 RNU7-102P-201ENST00000458948 62 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 RNU2-11P-201ENST00000459191 187 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 RNA5SP153-201ENST00000516498 76 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-453P-201ENST00000516819 85 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 SCARNA24.2-201ENST00000516968 130 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
TRAF3IP3Q9Y228 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.23-201ENST00000362496 106 ntBASIC0.29□□□□□ -2.36
TRAF3IP3Q9Y228 RNA5SP517-201ENST00000364724 117 ntBASIC0.29□□□□□ -2.36
TRAF3IP3Q9Y228 SNORA1-201ENST00000384107 130 ntBASIC0.29□□□□□ -2.36
TRAF3IP3Q9Y228 RNY3P5-201ENST00000384127 102 ntBASIC0.29□□□□□ -2.36
TRAF3IP3Q9Y228 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1299P-201ENST00000516316 100 ntBASIC0.29□□□□□ -2.36
TRAF3IP3Q9Y228 AL589743.1-201ENST00000551932 2712 ntBASIC0.29□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.82-201ENST00000363000 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.92-201ENST00000363043 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.235-201ENST00000364412 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.306-201ENST00000365015 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.312-201ENST00000365089 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.322-201ENST00000365151 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1189P-201ENST00000383958 107 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.650-201ENST00000459002 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.777-201ENST00000516982 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.771-201ENST00000598668 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.789-201ENST00000622480 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 MIR6717-201ENST00000622747 73 ntBASIC0.28□□□□□ -2.36
TRAF3IP3Q9Y228 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 MIR216A-201ENST00000385063 110 ntBASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 MT-TF-201ENST00000387314 71 ntBASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-1109P-201ENST00000391187 107 ntBASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 RNU7-156P-201ENST00000517214 74 ntBASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 MIR4282-201ENST00000583613 67 ntBASIC0.27□□□□□ -2.37
TRAF3IP3Q9Y228 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 Y_RNA.44-201ENST00000362676 108 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 Y_RNA.237-201ENST00000364439 102 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 Y_RNA.304-201ENST00000365011 112 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 SNORA33.2-201ENST00000365413 134 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 Y_RNA.432-201ENST00000384087 111 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-42P-201ENST00000384165 107 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 MIR518E-201ENST00000385252 88 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 MIR616-201ENST00000385293 97 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-1319P-201ENST00000390855 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-747P-201ENST00000390928 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-241P-201ENST00000391148 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-447P-201ENST00000410293 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-1118P-201ENST00000410382 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-1076P-201ENST00000410397 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-355P-201ENST00000410427 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-791P-201ENST00000410467 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-705P-201ENST00000410601 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-1100P-201ENST00000410691 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-860P-201ENST00000410860 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-1217P-201ENST00000411276 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-785P-201ENST00000411324 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU7-45P-201ENST00000459460 63 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-561P-201ENST00000516222 102 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNA5SP94-201ENST00000516917 108 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-570P-201ENST00000517051 105 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 U6.90-201ENST00000614007 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 MIR8066-201ENST00000617280 78 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 U6.70-201ENST00000620287 104 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 AC078938.1-201ENST00000620993 318 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAF3IP3Q9Y228 Y_RNA.202-201ENST00000364083 110 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-597P-201ENST00000365620 102 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 MIR518A1-201ENST00000385068 85 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-679P-201ENST00000391003 106 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 RNU6-1228P-201ENST00000391014 107 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 SNORA26-201ENST00000391286 122 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 AL606845.1-201ENST00000404881 255 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 MIR1257-201ENST00000408490 117 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 RNU2-70P-201ENST00000410718 179 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 Y_RNA.622-201ENST00000411091 108 ntBASIC0.25□□□□□ -2.37
TRAF3IP3Q9Y228 AC096949.1-201ENST00000412047 152 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 274.9 ms