Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
FAM53CQ9NYF3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
FAM53CQ9NYF3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 RNU6-315P-201ENST00000362666 107 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 RNU6-160P-201ENST00000384591 107 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 SNORD28B-201ENST00000390993 75 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 RNU6-613P-201ENST00000410412 108 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 AC093850.1-201ENST00000454121 251 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 RNU7-28P-201ENST00000516759 62 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 MIR514B-201ENST00000516774 80 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 MIR3152-201ENST00000579801 74 ntBASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
FAM53CQ9NYF3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
FAM53CQ9NYF3 AP000648.3-201ENST00000623539 4507 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 RNU6-424P-201ENST00000384367 105 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 MIR206-201ENST00000384872 86 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 MIR515-2-201ENST00000384883 83 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 MIR515-1-201ENST00000384884 83 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 RPL31P63-201ENST00000422565 375 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 S100A11P2-201ENST00000467589 312 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 RNU7-2P-201ENST00000516096 62 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 AC022202.1-201ENST00000613515 211 ntBASIC2.4□□□□□ -2.03
FAM53CQ9NYF3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 Z82195.2-201ENST00000612348 18351 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 AL445685.2-201ENST00000422551 342 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 SNORA59A-201ENST00000459326 152 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 RNA5SP168-201ENST00000516642 112 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 RNU6-539P-201ENST00000516665 103 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 AC105081.1-201ENST00000617727 106 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 uc_338.20-201ENST00000621563 178 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
FAM53CQ9NYF3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 RNU6-1244P-201ENST00000363614 108 ntBASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 SNORD38.1-201ENST00000363863 68 ntBASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 AC022018.1-201ENST00000430685 241 ntBASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 RNU7-153P-201ENST00000516455 62 ntBASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 MIR548AR-201ENST00000582191 57 ntBASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 MIR3935-201ENST00000583472 104 ntBASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 Y_RNA.788-201ENST00000622394 112 ntBASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 AL442644.1-201ENST00000454390 3105 ntBASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
FAM53CQ9NYF3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 RNU6-23P-201ENST00000363283 107 ntBASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 SNORD115-37-201ENST00000363768 82 ntBASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 Y_RNA.567-201ENST00000384736 106 ntBASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 SNORA11.2-201ENST00000408318 127 ntBASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 AC003685.2-201ENST00000422795 395 ntBASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 RPS29P28-201ENST00000446439 141 ntBASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 RNU7-12P-201ENST00000516030 62 ntBASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 AC027279.3-201ENST00000625055 122 ntBASIC2.37□□□□□ -2.03
FAM53CQ9NYF3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 RNU6-478P-201ENST00000363904 110 ntBASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 MIR9-1-201ENST00000385198 89 ntBASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 RNU6-129P-201ENST00000391022 107 ntBASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 RPS29P29-201ENST00000456396 171 ntBASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 AC125388.1-201ENST00000459631 156 ntBASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 RNA5SP341-201ENST00000516261 117 ntBASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 AL020996.3-201ENST00000606617 222 ntBASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 U4.3-201ENST00000621047 82 ntBASIC2.36□□□□□ -2.03
FAM53CQ9NYF3 MIR422A-201ENST00000362286 90 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 RNA5SP160-201ENST00000364866 120 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 Y_RNA.448-201ENST00000384185 108 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 SUMO2P12-201ENST00000405924 140 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 AC245047.7-201ENST00000440265 293 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 SNORD67.1-201ENST00000516618 108 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 AL513043.2-201ENST00000573941 143 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 AC243994.1-201ENST00000618627 109 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 MIR6766-201ENST00000622641 72 ntBASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
FAM53CQ9NYF3 RNU6-1094P-201ENST00000362416 104 ntBASIC2.34□□□□□ -2.03
FAM53CQ9NYF3 Y_RNA.340-201ENST00000365330 92 ntBASIC2.34□□□□□ -2.03
FAM53CQ9NYF3 MIR548G-201ENST00000408442 89 ntBASIC2.34□□□□□ -2.03
FAM53CQ9NYF3 SPINT5P-201ENST00000448174 155 ntBASIC2.34□□□□□ -2.03
FAM53CQ9NYF3 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
FAM53CQ9NYF3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.34□□□□□ -2.03
FAM53CQ9NYF3 MIR5094-201ENST00000578766 85 ntBASIC2.34□□□□□ -2.03
FAM53CQ9NYF3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
FAM53CQ9NYF3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
FAM53CQ9NYF3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
FAM53CQ9NYF3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
FAM53CQ9NYF3 RNU6-833P-201ENST00000363486 107 ntBASIC2.33□□□□□ -2.04
FAM53CQ9NYF3 RNA5SP139-201ENST00000364340 117 ntBASIC2.33□□□□□ -2.04
FAM53CQ9NYF3 MIR181B2-201ENST00000385004 89 ntBASIC2.33□□□□□ -2.04
FAM53CQ9NYF3 RNU6-1321P-201ENST00000390905 107 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms