Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AC095038.3-201ENST00000634439 195 ntBASIC2.45□□□□□ -2.02
TMEM39AQ9NV64 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.45□□□□□ -2.02
TMEM39AQ9NV64 SNORA22.1-201ENST00000362701 134 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 RNU6-640P-201ENST00000363693 105 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 Y_RNA.299-201ENST00000364973 94 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 RNU6-1067P-201ENST00000384752 107 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 MIR590-201ENST00000385008 97 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 MIR1912-201ENST00000410389 80 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 RNA5SP261-201ENST00000410536 106 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 SNORA19.1-201ENST00000410656 129 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 RNA5SP57-201ENST00000459463 123 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 RNU6-1258P-201ENST00000516911 111 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 AC141557.1-201ENST00000540982 400 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 DNAJC19P9-201ENST00000555084 351 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 AC245884.12-201ENST00000615364 59 ntBASIC2.44□□□□□ -2.02
TMEM39AQ9NV64 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 Y_RNA.369-201ENST00000365568 117 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 RNU6-913P-201ENST00000390913 95 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 SNORA26.6-201ENST00000391256 115 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 RNU6-1190P-201ENST00000410811 104 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 RPL23AP6-201ENST00000446637 472 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 RNU7-73P-201ENST00000458743 63 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 AC108729.3-201ENST00000513484 108 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 SNORA40.13-201ENST00000516379 120 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 AL020996.3-201ENST00000606617 222 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 AL137847.3-201ENST00000611521 109 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 MIR6132-201ENST00000622083 109 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 MIR6717-201ENST00000622747 73 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 MIR203B-201ENST00000636080 86 ntBASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TMEM39AQ9NV64 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 RNU6-661P-201ENST00000362409 107 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 RNU1-17P-201ENST00000363022 152 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 Y_RNA.537-201ENST00000384626 109 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 RNU6-109P-201ENST00000516364 107 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 RNU6-184P-201ENST00000516514 107 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 SNORA74.3-201ENST00000517108 154 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 RNU2-19P-201ENST00000517288 84 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 MIR6766-201ENST00000622641 72 ntBASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
TMEM39AQ9NV64 RNU6-1123P-201ENST00000362347 106 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 Y_RNA.78-201ENST00000362970 110 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 RNU6-203P-201ENST00000384038 104 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 RNU4-69P-201ENST00000410677 143 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 AC113410.1-201ENST00000505029 247 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 RNA5SP33-201ENST00000516687 98 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 MIR3618-201ENST00000580330 88 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 Y_RNA.773-201ENST00000607168 90 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 MIR6841-201ENST00000637129 72 ntBASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TMEM39AQ9NV64 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 SNORD115-2-201ENST00000362842 82 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 SNORD115-19-201ENST00000363098 82 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 SNORD115-18-201ENST00000363293 82 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 SNORD115-17-201ENST00000364612 82 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 SNORD115-20-201ENST00000365099 82 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 Y_RNA.470-201ENST00000384307 117 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 Y_RNA.507-201ENST00000384500 99 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 RNU6-1053P-201ENST00000515930 101 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 RNU6-904P-201ENST00000516206 101 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 RNU6-970P-201ENST00000516312 107 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 RNA5SP200-201ENST00000516360 103 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 MIR1255B1-201ENST00000636325 63 ntBASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
TMEM39AQ9NV64 Y_RNA.226-201ENST00000364337 114 ntBASIC2.39□□□□□ -2.03
TMEM39AQ9NV64 Y_RNA.430-201ENST00000384081 110 ntBASIC2.39□□□□□ -2.03
TMEM39AQ9NV64 AC055731.1-201ENST00000474387 401 ntBASIC2.39□□□□□ -2.03
TMEM39AQ9NV64 RNU6-917P-201ENST00000516294 104 ntBASIC2.39□□□□□ -2.03
TMEM39AQ9NV64 Y_RNA.818-201ENST00000618813 71 ntBASIC2.39□□□□□ -2.03
TMEM39AQ9NV64 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TMEM39AQ9NV64 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
TMEM39AQ9NV64 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TMEM39AQ9NV64 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TMEM39AQ9NV64 SNORD23.1-201ENST00000408212 104 ntBASIC2.38□□□□□ -2.03
TMEM39AQ9NV64 snoU13.16-201ENST00000459350 104 ntBASIC2.38□□□□□ -2.03
TMEM39AQ9NV64 RNU7-43P-201ENST00000516554 64 ntBASIC2.38□□□□□ -2.03
TMEM39AQ9NV64 MIR4498-201ENST00000577599 66 ntBASIC2.38□□□□□ -2.03
TMEM39AQ9NV64 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.38□□□□□ -2.03
TMEM39AQ9NV64 MIR548AE2-201ENST00000583456 67 ntBASIC2.38□□□□□ -2.03
TMEM39AQ9NV64 MIR6845-201ENST00000613182 61 ntBASIC2.38□□□□□ -2.03
TMEM39AQ9NV64 RNA5SP276-201ENST00000362580 94 ntBASIC2.37□□□□□ -2.03
TMEM39AQ9NV64 RNU6-363P-201ENST00000362895 105 ntBASIC2.37□□□□□ -2.03
TMEM39AQ9NV64 Y_RNA.155-201ENST00000363632 101 ntBASIC2.37□□□□□ -2.03
TMEM39AQ9NV64 MIR583-201ENST00000384846 75 ntBASIC2.37□□□□□ -2.03
TMEM39AQ9NV64 SNORD77B-201ENST00000391112 67 ntBASIC2.37□□□□□ -2.03
TMEM39AQ9NV64 AC004965.1-201ENST00000413033 213 ntBASIC2.37□□□□□ -2.03
TMEM39AQ9NV64 HMGN1P33-201ENST00000432945 451 ntBASIC2.37□□□□□ -2.03
TMEM39AQ9NV64 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms