Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 AC044792.1-201ENST00000593294 196 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 RNA5SP347-201ENST00000362445 119 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 snoU2_19.4-201ENST00000364329 80 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 RNU6-364P-201ENST00000384387 107 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 MT-TF-201ENST00000387314 71 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1228P-201ENST00000391014 107 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1109P-201ENST00000391187 107 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 AL606845.1-201ENST00000404881 255 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 SNRPGP8-201ENST00000454064 226 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 AC090897.1-201ENST00000580909 226 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
CCL28Q9NRJ3 MIR335-201ENST00000362173 94 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.304-201ENST00000365011 112 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 SNORD12C-201ENST00000386307 89 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-747P-201ENST00000390928 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-241P-201ENST00000391148 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 SNORD100-201ENST00000408573 76 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 MIR548J-201ENST00000408833 112 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-447P-201ENST00000410293 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-355P-201ENST00000410427 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-791P-201ENST00000410467 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-705P-201ENST00000410601 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-860P-201ENST00000410860 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 RNU6-785P-201ENST00000411324 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 SNORD92-201ENST00000585078 85 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 U6.90-201ENST00000614007 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 MIR6788-201ENST00000618842 66 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 U6.70-201ENST00000620287 104 ntBASIC0.31□□□□□ -2.36
CCL28Q9NRJ3 MIR302B-201ENST00000362188 73 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 MIR342-201ENST00000362212 99 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 MIR30D-201ENST00000362283 70 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.199-201ENST00000364014 102 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1227P-201ENST00000383981 107 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.590-201ENST00000410140 107 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 RNA5SP261-201ENST00000410536 106 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 RNU6-651P-201ENST00000411040 105 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 RNU7-102P-201ENST00000458948 62 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 RNU6-453P-201ENST00000516819 85 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 AC008608.1-201ENST00000603910 127 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CCL28Q9NRJ3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.23-201ENST00000362496 106 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 SNORA1-201ENST00000384107 130 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.542-201ENST00000384641 111 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 SNORA26.6-201ENST00000391256 115 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 RNU6-381P-201ENST00000391259 108 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.679-201ENST00000516416 91 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 RNU7-156P-201ENST00000517214 74 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 MIR4282-201ENST00000583613 67 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 MIR5197-201ENST00000583721 112 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 AL078603.1-201ENST00000603824 313 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 AC092634.7-201ENST00000621022 103 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 MIR6717-201ENST00000622747 73 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 U6.104-201ENST00000637979 90 ntBASIC0.29□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.224-201ENST00000364308 111 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 RNU4-17P-201ENST00000365598 141 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 RNU6-635P-201ENST00000516651 102 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 MIR5000-201ENST00000577717 103 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 MIR151B-201ENST00000584249 96 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 AL365265.1-201ENST00000621045 234 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 MIR5087-201ENST00000635826 76 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 MIR376A2-201ENST00000636782 80 ntBASIC0.28□□□□□ -2.36
CCL28Q9NRJ3 RNU6-653P-201ENST00000363074 106 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.422-201ENST00000384054 114 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.454-201ENST00000384224 113 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.512-201ENST00000384518 102 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.518-201ENST00000384552 113 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 MIR499A-201ENST00000384903 122 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 SNORA79-201ENST00000408376 140 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 MIR1302-6-201ENST00000408466 90 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 RNU7-80P-201ENST00000459562 61 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 AL442663.2-201ENST00000554385 511 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 MIR3129-201ENST00000581095 76 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 MIR8062-201ENST00000621515 85 ntBASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.27□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.11-201ENST00000362375 109 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.122-201ENST00000363331 96 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms