Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 MIR5009-201ENST00000578736 100 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 MIR5089-201ENST00000580047 84 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 AC021613.1-201ENST00000623880 111 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 RNA5SP276-201ENST00000362580 94 ntBASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 SNORA1.2-201ENST00000365189 134 ntBASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 snoU13.27-201ENST00000459278 104 ntBASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 RNA5SP57-201ENST00000459463 123 ntBASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 RNU7-6P-201ENST00000516845 62 ntBASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 AL773524.1-201ENST00000614065 229 ntBASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDLIM7Q9NR12 Z82195.2-201ENST00000612348 18351 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 MIRLET7G-201ENST00000362280 84 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 RNU6-457P-201ENST00000363999 107 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 Y_RNA.348-201ENST00000365403 103 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 Y_RNA.370-201ENST00000365589 108 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 SNORA51.10-201ENST00000384418 136 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 RNU6-905P-201ENST00000384434 107 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 AC244636.1-201ENST00000421152 228 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 AL512326.2-201ENST00000426359 151 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 AC099513.1-201ENST00000490423 301 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 MIR8070-201ENST00000616510 88 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 AP001318.4-201ENST00000616637 121 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 AL513423.1-201ENST00000621695 132 ntBASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PDLIM7Q9NR12 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 MIR337-201ENST00000362281 93 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 Y_RNA.355-201ENST00000365462 98 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 MIR526A1-201ENST00000384897 85 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 MIR660-201ENST00000385235 97 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 AL022718.1-201ENST00000412004 84 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 PGBD4P5-201ENST00000445958 426 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 RNA5SP445-201ENST00000515889 115 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 RNA5SP481-201ENST00000516814 122 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 AC004812.1-201ENST00000540773 146 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 AL627230.6-201ENST00000611129 280 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 SNORD3E-202ENST00000627253 216 ntBASIC2.23□□□□□ -2.05
PDLIM7Q9NR12 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 RNU6-640P-201ENST00000363693 105 ntBASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 RNU6-1113P-201ENST00000384348 107 ntBASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 BTF3P4-201ENST00000418852 495 ntBASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 RNU7-67P-201ENST00000459003 62 ntBASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 RPS27P21-201ENST00000486977 252 ntBASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 RNU6-958P-201ENST00000516995 106 ntBASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 MIR548AR-201ENST00000582191 57 ntBASIC2.22□□□□□ -2.05
PDLIM7Q9NR12 Y_RNA.531-201ENST00000384589 121 ntBASIC2.21□□□□□ -2.06
PDLIM7Q9NR12 MIR499A-201ENST00000384903 122 ntBASIC2.21□□□□□ -2.06
PDLIM7Q9NR12 SNORD28B-201ENST00000390993 75 ntBASIC2.21□□□□□ -2.06
PDLIM7Q9NR12 SNORA19.1-201ENST00000410656 129 ntBASIC2.21□□□□□ -2.06
PDLIM7Q9NR12 POLR2J4-204ENST00000418424 324 ntBASIC2.21□□□□□ -2.06
PDLIM7Q9NR12 SNORD13-201ENST00000459299 104 ntBASIC2.21□□□□□ -2.06
PDLIM7Q9NR12 AL513534.2-201ENST00000603836 250 ntBASIC2.21□□□□□ -2.06
PDLIM7Q9NR12 AL162726.3-218ENST00000636401 95 ntBASIC2.21□□□□□ -2.06
PDLIM7Q9NR12 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 RNA5SP190-201ENST00000365222 118 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 Y_RNA.369-201ENST00000365568 117 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 SNORA70.7-201ENST00000384159 133 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 MIR590-201ENST00000385008 97 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 RNA5SP100-201ENST00000410903 110 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 RNA5SP59-201ENST00000410922 110 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 AL445685.2-201ENST00000422551 342 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 RPS29P29-201ENST00000456396 171 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 SNORD123-201ENST00000459473 70 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 RPS23P4-201ENST00000487908 423 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 RNU6-109P-201ENST00000516364 107 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 RNU6-184P-201ENST00000516514 107 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 AC087741.2-201ENST00000619415 172 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 WWP1P1-201ENST00000466609 2769 ntBASIC2.2□□□□□ -2.06
PDLIM7Q9NR12 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 RNU6-661P-201ENST00000362409 107 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 Y_RNA.171-201ENST00000363760 102 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 RNU6-816P-201ENST00000390914 107 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 RNU6-1268P-201ENST00000391214 107 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 RNU6-1239P-201ENST00000391310 107 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 AL356379.1-201ENST00000414105 126 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 RPL39P25-201ENST00000449384 154 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 RNU7-53P-201ENST00000516705 60 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 AC141557.1-201ENST00000540982 400 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 AL359821.1-201ENST00000605519 182 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 AC095038.3-201ENST00000634439 195 ntBASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM7Q9NR12 MIR424-201ENST00000362227 98 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 RNY1P10-201ENST00000363268 113 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 Y_RNA.544-201ENST00000384650 113 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 RNU6-1319P-201ENST00000390855 104 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms