Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 RNU6-740P-201ENST00000364734 105 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-815P-201ENST00000384080 113 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 SNORA8.2-201ENST00000384372 139 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 MIR644A-201ENST00000385262 94 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-1228P-201ENST00000391014 107 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 SNORD93-201ENST00000408813 74 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.622-201ENST00000411091 108 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 MTND5P22-201ENST00000458380 195 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.631-201ENST00000459607 101 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 RNA5SP436-201ENST00000516020 115 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 SNORA4-201ENST00000584302 138 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 AC037487.3-201ENST00000606668 112 ntBASIC0.13□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 SNORA36.1-201ENST00000363424 132 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.210-201ENST00000364161 110 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-211P-201ENST00000384047 107 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 SNORA1-201ENST00000384107 130 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 MT-TD-201ENST00000387419 68 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 SNORA26.6-201ENST00000391256 115 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 SNRPGP8-201ENST00000454064 226 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 RNU7-96P-201ENST00000459535 64 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 AC131281.1-201ENST00000522984 164 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 AC078938.1-201ENST00000620993 318 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 MIR6717-201ENST00000622747 73 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 MIR376A2-201ENST00000636782 80 ntBASIC0.12□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.117-201ENST00000363294 101 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.304-201ENST00000365011 112 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.527-201ENST00000384573 102 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 SNORA8.3-201ENST00000384679 139 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 MIR626-201ENST00000385032 94 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 RNU2-70P-201ENST00000410718 179 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 AL731563.1-201ENST00000442202 214 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-1299P-201ENST00000516316 100 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.721-201ENST00000517207 102 ntBASIC0.11□□□□□ -2.39
EXOSC4Q9NPD3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 MIR302B-201ENST00000362188 73 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.152-201ENST00000363578 100 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 SNORA22B-201ENST00000383876 138 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-484P-201ENST00000384016 107 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-1289P-201ENST00000384431 106 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 MIR518E-201ENST00000385252 88 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 MT-TF-201ENST00000387314 71 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 RNU4-83P-201ENST00000410863 133 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-453P-201ENST00000516819 85 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 RNU6-988P-201ENST00000519081 107 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 AP003733.2-201ENST00000529409 171 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 MIR8066-201ENST00000617280 78 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 MIR6515-201ENST00000619843 57 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 uc_338.16-201ENST00000621804 95 ntBASIC0.1□□□□□ -2.39
EXOSC4Q9NPD3 Y_RNA.84-201ENST00000363011 104 ntBASIC0.09□□□□□ -2.4
EXOSC4Q9NPD3 SNORD114-23-201ENST00000363536 72 ntBASIC0.09□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.216-201ENST00000364205 93 ntBASIC0.09□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.431-201ENST00000384086 102 ntBASIC0.09□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.509-201ENST00000384506 99 ntBASIC0.09□□□□□ -2.4
EXOSC4Q9NPD3 RNU6-651P-201ENST00000411040 105 ntBASIC0.09□□□□□ -2.4
EXOSC4Q9NPD3 MTND4LP30-201ENST00000454092 297 ntBASIC0.09□□□□□ -2.4
EXOSC4Q9NPD3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.09□□□□□ -2.4
EXOSC4Q9NPD3 UBE2WP1-201ENST00000362030 340 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.13-201ENST00000362403 112 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.23-201ENST00000362496 106 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 RNU6-403P-201ENST00000363163 104 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 SERF1AP1-201ENST00000514575 187 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 RNU6-863P-201ENST00000515989 104 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 AC113195.1-201ENST00000579952 141 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.08□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.122-201ENST00000363331 96 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.138-201ENST00000363462 102 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 snoU2_19.4-201ENST00000364329 80 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 Y_RNA.455-201ENST00000384230 98 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 U8.15-201ENST00000390947 134 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 RNA5SP237-201ENST00000410414 113 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 AC069271.1-201ENST00000445577 156 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 RPL39P25-201ENST00000449384 154 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 RNU6-1338P-201ENST00000516328 91 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 RNU6-126P-201ENST00000516685 103 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 AC069113.3-201ENST00000521019 150 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 MIR5688-201ENST00000580619 83 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 MIR3129-201ENST00000581095 76 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 AL662814.1-201ENST00000617364 121 ntBASIC0.07□□□□□ -2.4
EXOSC4Q9NPD3 AL596211.1-201ENST00000569873 2277 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms