Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 BX510359.4-201ENST00000423750 193 ntBASIC2.22□□□□□ -2.05
GCM1Q9NP62 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.22□□□□□ -2.05
GCM1Q9NP62 UBE2DNL-203ENST00000474922 222 ntBASIC2.22□□□□□ -2.05
GCM1Q9NP62 RNA5SP282-201ENST00000516355 108 ntBASIC2.22□□□□□ -2.05
GCM1Q9NP62 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.22□□□□□ -2.05
GCM1Q9NP62 AC243994.1-201ENST00000618627 109 ntBASIC2.22□□□□□ -2.05
GCM1Q9NP62 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.22□□□□□ -2.05
GCM1Q9NP62 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
GCM1Q9NP62 RNU6-24P-201ENST00000384440 107 ntBASIC2.21□□□□□ -2.06
GCM1Q9NP62 RNU6-1067P-201ENST00000384752 107 ntBASIC2.21□□□□□ -2.06
GCM1Q9NP62 RNU6-913P-201ENST00000390913 95 ntBASIC2.21□□□□□ -2.06
GCM1Q9NP62 RNU7-2P-201ENST00000516096 62 ntBASIC2.21□□□□□ -2.06
GCM1Q9NP62 SNORA31.15-201ENST00000516771 132 ntBASIC2.21□□□□□ -2.06
GCM1Q9NP62 MIR548AR-201ENST00000582191 57 ntBASIC2.21□□□□□ -2.06
GCM1Q9NP62 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
GCM1Q9NP62 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
GCM1Q9NP62 SNORD38.1-201ENST00000363863 68 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 RNU11-3P-201ENST00000391111 133 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 Y_RNA.611-201ENST00000410682 108 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 AC093850.1-201ENST00000454121 251 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 SNORD123-201ENST00000459473 70 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 UBL5P1-201ENST00000507979 193 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 RPL23AP94-201ENST00000512518 302 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.2□□□□□ -2.06
GCM1Q9NP62 AC019288.1-201ENST00000557918 224 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 AC006023.1-201ENST00000603944 259 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 AC103810.7-201ENST00000607821 91 ntBASIC2.2□□□□□ -2.06
GCM1Q9NP62 Y_RNA.4-201ENST00000362333 112 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 Y_RNA.140-201ENST00000363474 103 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 Y_RNA.247-201ENST00000364500 92 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 Y_RNA.537-201ENST00000384626 109 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 SNORD28B-201ENST00000390993 75 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 HMGN2P39-201ENST00000398005 273 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 AL445685.2-201ENST00000422551 342 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 MIR3162-201ENST00000581818 82 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 RNU6-86P-201ENST00000606534 107 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 AC006160.2-201ENST00000637708 154 ntBASIC2.19□□□□□ -2.06
GCM1Q9NP62 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
GCM1Q9NP62 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
GCM1Q9NP62 RNU6-1163P-201ENST00000364516 107 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 MIR597-201ENST00000384968 97 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 SNORD23.1-201ENST00000408212 104 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 RPS12P2-201ENST00000439728 269 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 RNU6-65P-201ENST00000516332 98 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 RNU6-1006P-201ENST00000516998 103 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.18□□□□□ -2.06
GCM1Q9NP62 MIR4298-201ENST00000584380 73 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 AL513423.1-201ENST00000621695 132 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 MIR548BB-201ENST00000626714 66 ntBASIC2.18□□□□□ -2.06
GCM1Q9NP62 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.18□□□□□ -2.06
GCM1Q9NP62 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GCM1Q9NP62 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GCM1Q9NP62 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
GCM1Q9NP62 RNU6-509P-201ENST00000363519 107 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 MIR520A-201ENST00000384862 85 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 MIR206-201ENST00000384872 86 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 MIR518A2-201ENST00000384966 87 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 RNA5SP210-201ENST00000391034 120 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 Y_RNA.607-201ENST00000410597 98 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 RNU2-7P-201ENST00000410794 178 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 AC245047.7-201ENST00000440265 293 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 RPS29P28-201ENST00000446439 141 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 snoU13.16-201ENST00000459350 104 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 RNA5SP82-201ENST00000516707 92 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.17□□□□□ -2.06
GCM1Q9NP62 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 MIR4662A-201ENST00000637499 67 ntBASIC2.17□□□□□ -2.06
GCM1Q9NP62 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
GCM1Q9NP62 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
GCM1Q9NP62 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.16□□□□□ -2.06
GCM1Q9NP62 AP000648.3-201ENST00000623539 4507 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 RNU6-633P-201ENST00000362612 103 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 RNA5SP68-201ENST00000363885 119 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 Y_RNA.191-201ENST00000363972 113 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 Y_RNA.354-201ENST00000365448 111 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.16□□□□□ -2.06
GCM1Q9NP62 HMGN1P33-201ENST00000432945 451 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 RNU7-35P-201ENST00000517174 62 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 MIR3670-2-201ENST00000582974 65 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 MIR4672-201ENST00000583126 81 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 MIR3670-1-201ENST00000584160 65 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 MIR3670-3-201ENST00000584855 65 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 MIR8055-201ENST00000610739 97 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 MIR3670-4-201ENST00000612260 65 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 MIR6817-201ENST00000615588 66 ntBASIC2.16□□□□□ -2.06
GCM1Q9NP62 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.16□□□□□ -2.06
GCM1Q9NP62 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
GCM1Q9NP62 RNU6-652P-201ENST00000365488 107 ntBASIC2.15□□□□□ -2.07
GCM1Q9NP62 DEFA7P-201ENST00000382676 285 ntBASIC2.15□□□□□ -2.07
GCM1Q9NP62 RNU6-342P-201ENST00000384521 104 ntBASIC2.15□□□□□ -2.07
GCM1Q9NP62 MIR526A1-201ENST00000384897 85 ntBASIC2.15□□□□□ -2.07
GCM1Q9NP62 MIR27B-201ENST00000385129 97 ntBASIC2.15□□□□□ -2.07
GCM1Q9NP62 MIR660-201ENST00000385235 97 ntBASIC2.15□□□□□ -2.07
GCM1Q9NP62 AC021506.2-201ENST00000612354 169 ntBASIC2.15□□□□□ -2.07
GCM1Q9NP62 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.15□□□□□ -2.07
GCM1Q9NP62 AC080100.1-201ENST00000624239 5356 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms