Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SNORA1-201ENST00000384107 130 ntBASIC0.66□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.440-201ENST00000384120 114 ntBASIC0.66□□□□□ -2.3
RNF41Q9H4P4 SNORD77.3-201ENST00000391113 65 ntBASIC0.66□□□□□ -2.3
RNF41Q9H4P4 RPS29P24-201ENST00000486345 171 ntBASIC0.66□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.679-201ENST00000516416 91 ntBASIC0.66□□□□□ -2.3
RNF41Q9H4P4 AL442067.1-201ENST00000613261 223 ntBASIC0.66□□□□□ -2.3
RNF41Q9H4P4 AC022709.1-201ENST00000615967 87 ntBASIC0.66□□□□□ -2.3
RNF41Q9H4P4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
RNF41Q9H4P4 RNU1-133P-201ENST00000364867 167 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.292-201ENST00000364904 97 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 RNY4P28-201ENST00000365281 93 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.410-201ENST00000383992 113 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 RNU6-205P-201ENST00000390858 107 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 SNORA26-201ENST00000391286 122 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 RNU2-70P-201ENST00000410718 179 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 MTCYBP9-201ENST00000431021 303 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.668-201ENST00000516233 93 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 RNU6-327P-201ENST00000516270 127 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 AC025627.3-201ENST00000582078 182 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 MIR4264-201ENST00000583520 66 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 uc_338.6-201ENST00000613544 171 ntBASIC0.65□□□□□ -2.31
RNF41Q9H4P4 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.539-201ENST00000384635 107 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 RNU4-43P-201ENST00000410628 137 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 MTND2P23-201ENST00000422990 651 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.64□□□□□ -2.31
RNF41Q9H4P4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 RNU6-998P-201ENST00000515894 101 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 7SK.10-201ENST00000621414 298 ntBASIC0.64□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.262-201ENST00000364641 102 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.288-201ENST00000364854 92 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.354-201ENST00000365448 111 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 HMGN1P33-201ENST00000432945 451 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 RNY3P16-201ENST00000516338 101 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 AP000753.3-201ENST00000604083 169 ntBASIC0.63□□□□□ -2.31
RNF41Q9H4P4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.54-201ENST00000362766 105 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.199-201ENST00000364014 102 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 RNU4-17P-201ENST00000365598 141 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 SNORA26.6-201ENST00000391256 115 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 RNU6-994P-201ENST00000410507 111 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 RNU6-602P-201ENST00000411155 105 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.62□□□□□ -2.31
RNF41Q9H4P4 AC244098.3-201ENST00000424803 96 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 AC092628.1-201ENST00000436250 252 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 RNU7-96P-201ENST00000459535 64 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 RNU7-53P-201ENST00000516705 60 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 MIR6740-201ENST00000618268 113 ntBASIC0.62□□□□□ -2.31
RNF41Q9H4P4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.61□□□□□ -2.31
RNF41Q9H4P4 MIR1-1-201ENST00000362147 71 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 RNU6-103P-201ENST00000363686 107 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 RNU6-934P-201ENST00000365154 107 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.556-201ENST00000384677 113 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 SNORD105-201ENST00000386910 85 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.61□□□□□ -2.31
RNF41Q9H4P4 AL138752.1-201ENST00000452964 351 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 AC104465.1-201ENST00000611365 139 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 AL136317.1-201ENST00000612653 226 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 MIR6513-201ENST00000621188 64 ntBASIC0.61□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.20-201ENST00000362479 113 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.162-201ENST00000363683 102 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.269-201ENST00000364685 89 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 SNORD38B-201ENST00000384690 67 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 MIR548H3-201ENST00000408771 118 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 SNORD83.1-201ENST00000411362 77 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 AC067940.1-201ENST00000458411 300 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 RNU2-11P-201ENST00000459191 187 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.680-201ENST00000516441 93 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 MIR4744-201ENST00000581563 82 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 AC020891.4-201ENST00000605745 93 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 SNORD38B-202ENST00000625943 69 ntBASIC0.6□□□□□ -2.31
RNF41Q9H4P4 RNU6-728P-201ENST00000365375 104 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
RNF41Q9H4P4 RNU6-1292P-201ENST00000383856 107 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 RNU6-110P-201ENST00000384508 104 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.542-201ENST00000384641 111 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 MIR563-201ENST00000385080 79 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.59□□□□□ -2.31
RNF41Q9H4P4 AC015818.7-201ENST00000428754 109 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 AC087499.7-201ENST00000441958 109 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 snoU13.2-201ENST00000459201 104 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 Y_RNA.673-201ENST00000516306 88 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 RNU6-1045P-201ENST00000516321 107 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 MIR4308-201ENST00000580634 81 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 MIR3129-201ENST00000581095 76 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 MIR4719-201ENST00000585233 84 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 AL365205.2-201ENST00000594586 68 ntBASIC0.59□□□□□ -2.31
RNF41Q9H4P4 RNU6-978P-201ENST00000364371 103 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms