Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 MIR568-201ENST00000385036 95 ntBASIC0.73□□□□□ -2.29
SNX25Q9H3E2 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
SNX25Q9H3E2 Y_RNA.149-201ENST00000363558 117 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 Y_RNA.292-201ENST00000364904 97 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 Y_RNA.410-201ENST00000383992 113 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 Y_RNA.440-201ENST00000384120 114 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 Y_RNA.562-201ENST00000384695 113 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 SNORD77.3-201ENST00000391113 65 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 RPS26P5-201ENST00000418544 335 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 AL138752.1-201ENST00000452964 351 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 AL136317.1-201ENST00000612653 226 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 AL442067.1-201ENST00000613261 223 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 MIR376A2-201ENST00000636782 80 ntBASIC0.72□□□□□ -2.29
SNX25Q9H3E2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SNX25Q9H3E2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.71□□□□□ -2.3
SNX25Q9H3E2 MIR1-1-201ENST00000362147 71 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.269-201ENST00000364685 89 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 SNORD83.1-201ENST00000411362 77 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 HMGN1P33-201ENST00000432945 451 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 RNU7-53P-201ENST00000516705 60 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 uc_338.6-201ENST00000613544 171 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.262-201ENST00000364641 102 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 RNU6-934P-201ENST00000365154 107 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 RNU4-17P-201ENST00000365598 141 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 RNU6-1189P-201ENST00000383958 107 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 SNORD105-201ENST00000386910 85 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 RNU6-1190P-201ENST00000410811 104 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.7□□□□□ -2.3
SNX25Q9H3E2 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 RNU6-998P-201ENST00000515894 101 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.673-201ENST00000516306 88 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 SCARNA15.1-201ENST00000516384 125 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 AC004812.1-201ENST00000540773 146 ntBASIC0.7□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.7-201ENST00000362352 102 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.288-201ENST00000364854 92 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 RNY4P28-201ENST00000365281 93 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 SNORD38B-201ENST00000384690 67 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 RNU4-43P-201ENST00000410628 137 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 RNU6-602P-201ENST00000411155 105 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 AC244098.3-201ENST00000424803 96 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 MTCYBP9-201ENST00000431021 303 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 RNU2-11P-201ENST00000459191 187 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 RNU7-96P-201ENST00000459535 64 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 MTND1P19-201ENST00000511780 315 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 RNU6-327P-201ENST00000516270 127 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 MIR6740-201ENST00000618268 113 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 SNORD38B-202ENST00000625943 69 ntBASIC0.69□□□□□ -2.3
SNX25Q9H3E2 MIR342-201ENST00000362212 99 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SNX25Q9H3E2 RNU6-110P-201ENST00000384508 104 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 SNORD58.1-201ENST00000391313 66 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 MTND2P23-201ENST00000422990 651 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 RNU7-62P-201ENST00000458856 62 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 RNY3P16-201ENST00000516338 101 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 MIR4771-2-201ENST00000577758 74 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 MIR4771-1-201ENST00000582617 74 ntBASIC0.68□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.539-201ENST00000384635 107 ntBASIC0.67□□□□□ -2.3
SNX25Q9H3E2 RNU1-119P-201ENST00000391122 165 ntBASIC0.67□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.668-201ENST00000516233 93 ntBASIC0.67□□□□□ -2.3
SNX25Q9H3E2 RNU6-103P-201ENST00000363686 107 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 SNORA1.1-201ENST00000364671 133 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 RNU6-728P-201ENST00000365375 104 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 Y_RNA.508-201ENST00000384502 114 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 SNORA26.6-201ENST00000391256 115 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 MIR548I3-201ENST00000408378 149 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 MIR548H3-201ENST00000408771 118 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.66□□□□□ -2.3
SNX25Q9H3E2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.66□□□□□ -2.3
SNX25Q9H3E2 MIR3129-201ENST00000581095 76 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 MIR4744-201ENST00000581563 82 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 AC020891.4-201ENST00000605745 93 ntBASIC0.66□□□□□ -2.3
SNX25Q9H3E2 SNORD27-201ENST00000363981 72 ntBASIC0.65□□□□□ -2.31
SNX25Q9H3E2 Y_RNA.542-201ENST00000384641 111 ntBASIC0.65□□□□□ -2.31
SNX25Q9H3E2 Y_RNA.556-201ENST00000384677 113 ntBASIC0.65□□□□□ -2.31
SNX25Q9H3E2 RNU6-977P-201ENST00000516411 103 ntBASIC0.65□□□□□ -2.31
SNX25Q9H3E2 AC022709.1-201ENST00000615967 87 ntBASIC0.65□□□□□ -2.31
SNX25Q9H3E2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
SNX25Q9H3E2 AC010332.2-201ENST00000613083 1904 ntBASIC0.64□□□□□ -2.31
SNX25Q9H3E2 Y_RNA.308-201ENST00000365043 101 ntBASIC0.64□□□□□ -2.31
SNX25Q9H3E2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.64□□□□□ -2.31
SNX25Q9H3E2 RNU6-1292P-201ENST00000383856 107 ntBASIC0.64□□□□□ -2.31
SNX25Q9H3E2 MIR520F-201ENST00000384824 87 ntBASIC0.64□□□□□ -2.31
SNX25Q9H3E2 MIR588-201ENST00000384900 83 ntBASIC0.64□□□□□ -2.31
SNX25Q9H3E2 MIR563-201ENST00000385080 79 ntBASIC0.64□□□□□ -2.31
SNX25Q9H3E2 SNORD12C-201ENST00000386307 89 ntBASIC0.64□□□□□ -2.31
SNX25Q9H3E2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms