Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 SNORD115-36-201ENST00000365629 82 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 RNU6-1168P-201ENST00000390831 104 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 RNU6-1154P-201ENST00000391001 104 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 RNU6-321P-201ENST00000410912 106 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.32□□□□□ -2.2
MMP28Q9H239 AL158147.1-201ENST00000443970 75 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 SNORA31.4-201ENST00000516049 129 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 RNU6-479P-201ENST00000516348 105 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 RNU6-62P-201ENST00000516526 102 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 AC015688.6-201ENST00000577737 104 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 MIR4422-201ENST00000581938 83 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.32□□□□□ -2.2
MMP28Q9H239 SNORD115-40-201ENST00000606510 82 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 AL596211.1-201ENST00000569873 2277 ntBASIC1.32□□□□□ -2.2
MMP28Q9H239 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
MMP28Q9H239 MIR337-201ENST00000362281 93 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 AC008267.6-201ENST00000441664 139 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.31□□□□□ -2.2
MMP28Q9H239 RPS29P24-201ENST00000486345 171 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 RNU6-772P-201ENST00000516042 105 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 RNU6-240P-201ENST00000516098 97 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 RNU6-313P-201ENST00000516317 112 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 RNU6-659P-201ENST00000516454 104 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 RNU7-70P-201ENST00000516941 66 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 SNORA74.3-201ENST00000517108 154 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 IGKV1-22-201ENST00000524313 326 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 HSPE1P19-201ENST00000603327 295 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 MIR8063-201ENST00000621930 81 ntBASIC1.31□□□□□ -2.2
MMP28Q9H239 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.31□□□□□ -2.2
MMP28Q9H239 RNU1-133P-201ENST00000364867 167 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 SNORA1.2-201ENST00000365189 134 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 RNU6-1081P-201ENST00000384537 107 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 MIR653-201ENST00000385279 96 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 TRMT112P2-201ENST00000512910 132 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 RNU6-998P-201ENST00000515894 101 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 RNU6-781P-201ENST00000516377 101 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 RNU6-922P-201ENST00000516753 99 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 AC090049.2-201ENST00000550377 109 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 AL359821.1-201ENST00000605519 182 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 BX248123.2-201ENST00000606318 124 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 AL161722.3-201ENST00000605789 2983 ntBASIC1.3□□□□□ -2.2
MMP28Q9H239 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU6-349P-201ENST00000362402 107 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU6-647P-201ENST00000364243 107 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU4-16P-201ENST00000364737 141 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 Y_RNA.366-201ENST00000365540 102 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 MIR1287-201ENST00000408492 90 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 Y_RNA.630-201ENST00000411370 108 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU2-11P-201ENST00000459191 187 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU7-45P-201ENST00000459460 63 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU7-96P-201ENST00000459535 64 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU2-13P-201ENST00000515909 113 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU6-1061P-201ENST00000516530 99 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU6-958P-201ENST00000516995 106 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 DNAJC19P9-201ENST00000555084 351 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 MIR4764-201ENST00000580680 88 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 MIR4791-201ENST00000607666 84 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.29□□□□□ -2.2
MMP28Q9H239 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MMP28Q9H239 RNU6-690P-201ENST00000365242 106 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 RNY1P6-201ENST00000384193 109 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 AL451046.2-201ENST00000403074 277 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 AL035398.1-201ENST00000430869 322 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 RNU7-67P-201ENST00000459003 62 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 RNU7-80P-201ENST00000459562 61 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 AC107297.1-201ENST00000459991 176 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 RNU6-322P-201ENST00000516010 103 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 RN7SKP19-201ENST00000516016 252 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 AC019176.1-201ENST00000518519 225 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 AC133485.4-201ENST00000561835 220 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 AC138907.4-201ENST00000570107 226 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 MIR548AI-201ENST00000579940 88 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 AC243994.1-201ENST00000618627 109 ntBASIC1.28□□□□□ -2.2
MMP28Q9H239 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.28□□□□□ -2.2
MMP28Q9H239 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.27□□□□□ -2.21
MMP28Q9H239 MIR302B-201ENST00000362188 73 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 MIR302D-201ENST00000362275 68 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 RNU6-1290P-201ENST00000362957 109 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 RNA5SP205-201ENST00000364653 136 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 SNORD58C-201ENST00000365223 64 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 SNORA24-201ENST00000384096 131 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 Y_RNA.454-201ENST00000384224 113 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 MIR520C-201ENST00000385005 87 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 RNU6-913P-201ENST00000390913 95 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 Y_RNA.617-201ENST00000410920 90 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 RNU7-41P-201ENST00000515917 61 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 RNU7-43P-201ENST00000516554 64 ntBASIC1.27□□□□□ -2.21
MMP28Q9H239 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms