Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.35□□□□□ -2.35
COMMD4Q9H0A8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
COMMD4Q9H0A8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
COMMD4Q9H0A8 RNU6-740P-201ENST00000364734 105 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 MIR1257-201ENST00000408490 117 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 RNU7-102P-201ENST00000458948 62 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 RNU6-229P-201ENST00000516614 102 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 RNU7-156P-201ENST00000517214 74 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 AC090897.1-201ENST00000580909 226 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 AL356055.1-201ENST00000602528 446 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 AC008608.1-201ENST00000603910 127 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
COMMD4Q9H0A8 MIR302B-201ENST00000362188 73 ntBASIC0.33□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.164-201ENST00000363709 102 ntBASIC0.33□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.304-201ENST00000365011 112 ntBASIC0.33□□□□□ -2.36
COMMD4Q9H0A8 SNORA33.2-201ENST00000365413 134 ntBASIC0.33□□□□□ -2.36
COMMD4Q9H0A8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.33□□□□□ -2.36
COMMD4Q9H0A8 TRBVB-201ENST00000477100 408 ntBASIC0.33□□□□□ -2.36
COMMD4Q9H0A8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.33□□□□□ -2.36
COMMD4Q9H0A8 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.33□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.199-201ENST00000364014 102 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.237-201ENST00000364439 102 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.351-201ENST00000365436 96 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.354-201ENST00000365448 111 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 RNU6-639P-201ENST00000384074 107 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 MIR499A-201ENST00000384903 122 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 MIR563-201ENST00000385080 79 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 AL606845.1-201ENST00000404881 255 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 SNORD100-201ENST00000408573 76 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 RNU6-651P-201ENST00000411040 105 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 AC098934.3-201ENST00000430450 190 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 RNU6-453P-201ENST00000516819 85 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 AP001282.2-201ENST00000616149 309 ntBASIC0.32□□□□□ -2.36
COMMD4Q9H0A8 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 MIR30D-201ENST00000362283 70 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 snoU2_19.4-201ENST00000364329 80 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 SNORA1-201ENST00000384107 130 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 MIR616-201ENST00000385293 97 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 MT-TF-201ENST00000387314 71 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 SNORD92-201ENST00000585078 85 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 AC097639.2-201ENST00000603159 172 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 MIR6717-201ENST00000622747 73 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 MIR5087-201ENST00000635826 76 ntBASIC0.31□□□□□ -2.36
COMMD4Q9H0A8 RNU6-797P-201ENST00000363101 109 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 RNU6-1228P-201ENST00000391014 107 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 RNU6-1109P-201ENST00000391187 107 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 SNORD2.1-201ENST00000458762 69 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 RNU7-45P-201ENST00000459460 63 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 SNORA25.12-201ENST00000516202 82 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.701-201ENST00000516812 110 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 MIR6513-201ENST00000621188 64 ntBASIC0.3□□□□□ -2.36
COMMD4Q9H0A8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.23-201ENST00000362496 106 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.82-201ENST00000363000 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.92-201ENST00000363043 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.235-201ENST00000364412 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 RNA5SP517-201ENST00000364724 117 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 RNU1-133P-201ENST00000364867 167 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.306-201ENST00000365015 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.312-201ENST00000365089 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.322-201ENST00000365151 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 RNU6-713P-201ENST00000384761 107 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 SNORA26.6-201ENST00000391256 115 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.590-201ENST00000410140 107 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 RNA5SP261-201ENST00000410536 106 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 MTCYBP6-201ENST00000441810 138 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.650-201ENST00000459002 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.679-201ENST00000516416 91 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.777-201ENST00000516982 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.771-201ENST00000598668 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 Y_RNA.789-201ENST00000622480 102 ntBASIC0.29□□□□□ -2.36
COMMD4Q9H0A8 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 MIR216A-201ENST00000385063 110 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 RNU7-80P-201ENST00000459562 61 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 RNU6-448P-201ENST00000517052 107 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 MIR3129-201ENST00000581095 76 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 AC044792.1-201ENST00000593294 196 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 U2.14-201ENST00000615943 113 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 AL365265.1-201ENST00000621045 234 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 AC243829.3-201ENST00000622177 108 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 MIR376A2-201ENST00000636782 80 ntBASIC0.28□□□□□ -2.36
COMMD4Q9H0A8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.512-201ENST00000384518 102 ntBASIC0.27□□□□□ -2.37
COMMD4Q9H0A8 SNORD93-201ENST00000408813 74 ntBASIC0.27□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.618-201ENST00000410949 107 ntBASIC0.27□□□□□ -2.37
COMMD4Q9H0A8 SNORA40.8-201ENST00000411034 126 ntBASIC0.27□□□□□ -2.37
COMMD4Q9H0A8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms