Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 RNU6-998P-201ENST00000515894 101 ntBASIC0.7□□□□□ -2.3
KLHL4Q9C0H6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 RNU6-653P-201ENST00000363074 106 ntBASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 Y_RNA.440-201ENST00000384120 114 ntBASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 SNORD77.3-201ENST00000391113 65 ntBASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 Y_RNA.622-201ENST00000411091 108 ntBASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 RNU6-453P-201ENST00000516819 85 ntBASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
KLHL4Q9C0H6 Y_RNA.262-201ENST00000364641 102 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 SNORA1.1-201ENST00000364671 133 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 Y_RNA.354-201ENST00000365448 111 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 RNU4-17P-201ENST00000365598 141 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 RNU6-738P-201ENST00000384531 106 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 Y_RNA.542-201ENST00000384641 111 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 MIR18B-201ENST00000454574 71 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
KLHL4Q9C0H6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 RNU6-103P-201ENST00000363686 107 ntBASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 Y_RNA.199-201ENST00000364014 102 ntBASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 MIR548I3-201ENST00000408378 149 ntBASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 RNU4-43P-201ENST00000410628 137 ntBASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 snoU13.21-201ENST00000459368 105 ntBASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 AC008737.2-201ENST00000599446 118 ntBASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 AL442067.1-201ENST00000613261 223 ntBASIC0.67□□□□□ -2.3
KLHL4Q9C0H6 RNU6-728P-201ENST00000365375 104 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 RNU6-1011P-201ENST00000384668 107 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 SNORA79-201ENST00000408376 140 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 RNU6-602P-201ENST00000411155 105 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 SNORD83.1-201ENST00000411362 77 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 RNU2-11P-201ENST00000459191 187 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 RNA5SP436-201ENST00000516020 115 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 RNU6-977P-201ENST00000516411 103 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
KLHL4Q9C0H6 Y_RNA.149-201ENST00000363558 117 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.416-201ENST00000384014 113 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 MIR598-201ENST00000384868 97 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 MIR573-201ENST00000384964 99 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 MIR4771-2-201ENST00000577758 74 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 MIR4804-201ENST00000581683 73 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 MIR4771-1-201ENST00000582617 74 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 AC011921.3-201ENST00000605540 361 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 MIR6740-201ENST00000618268 113 ntBASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.23-201ENST00000362496 106 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.47-201ENST00000362697 108 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 RNU4-45P-201ENST00000365469 141 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 RNU6-1292P-201ENST00000383856 107 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.396-201ENST00000383949 103 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 MIR520F-201ENST00000384824 87 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 MIR548H3-201ENST00000408771 118 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 RNA5SP261-201ENST00000410536 106 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 HMGN1P33-201ENST00000432945 451 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 snoU13.2-201ENST00000459201 104 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 RNU6-1132P-201ENST00000459214 107 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 MIR4643-201ENST00000577473 78 ntBASIC0.64□□□□□ -2.31
KLHL4Q9C0H6 SNORA1-201ENST00000384107 130 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 MIR588-201ENST00000384900 83 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 MIR563-201ENST00000385080 79 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 MIR613-201ENST00000385248 95 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 RNU6-177P-201ENST00000411257 104 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 AL358176.2-201ENST00000425769 204 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 MIR4676-201ENST00000583078 72 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 MIR5197-201ENST00000583721 112 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 AL365205.2-201ENST00000594586 68 ntBASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
KLHL4Q9C0H6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 RNU1-133P-201ENST00000364867 167 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.292-201ENST00000364904 97 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.556-201ENST00000384677 113 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.562-201ENST00000384695 113 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 MIR520H-201ENST00000385126 88 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 RNU6-1165P-201ENST00000410119 107 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.618-201ENST00000410949 107 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 AL138752.1-201ENST00000452964 351 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 SNORD127-201ENST00000458892 86 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 RNU7-80P-201ENST00000459562 61 ntBASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.62□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.7-201ENST00000362352 102 ntBASIC0.61□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.288-201ENST00000364854 92 ntBASIC0.61□□□□□ -2.31
KLHL4Q9C0H6 Y_RNA.454-201ENST00000384224 113 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 314.5 ms