Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL035398.1-201ENST00000430869 322 ntBASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 RNU7-67P-201ENST00000459003 62 ntBASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 RNU7-107P-201ENST00000459121 61 ntBASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 RNU6-998P-201ENST00000515894 101 ntBASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 RN7SKP19-201ENST00000516016 252 ntBASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 SNORA44.1-201ENST00000517031 108 ntBASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 AC015688.6-201ENST00000577737 104 ntBASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 MIR8070-201ENST00000616510 88 ntBASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.68□□□□□ -2.14
AMBRA1Q9C0C7 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 MIR302B-201ENST00000362188 73 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 RNU6-349P-201ENST00000362402 107 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 RNA5SP205-201ENST00000364653 136 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 SNORA70.7-201ENST00000384159 133 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 Y_RNA.617-201ENST00000410920 90 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 SNX2P2-201ENST00000424553 323 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 snoU13.9-201ENST00000458927 103 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 RNU6-958P-201ENST00000516995 106 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 AC133485.4-201ENST00000561835 220 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 AC138907.4-201ENST00000570107 226 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 AL513534.2-201ENST00000603836 250 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 AC108081.1-201ENST00000604358 221 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 AL359821.1-201ENST00000605519 182 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 MIR4791-201ENST00000607666 84 ntBASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
AMBRA1Q9C0C7 MIR570-201ENST00000384917 97 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 MIR520C-201ENST00000385005 87 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 AL451046.2-201ENST00000403074 277 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 RPS29P29-201ENST00000456396 171 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 RNU2-11P-201ENST00000459191 187 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 RPS29P11-201ENST00000496507 171 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 RNU7-43P-201ENST00000516554 64 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 MIR4764-201ENST00000580680 88 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 AL359881.1-201ENST00000602916 267 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 AC243994.1-201ENST00000618627 109 ntBASIC1.66□□□□□ -2.14
AMBRA1Q9C0C7 SNORA24-201ENST00000384096 131 ntBASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 RNY1P6-201ENST00000384193 109 ntBASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 Y_RNA.525-201ENST00000384570 113 ntBASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-240P-201ENST00000516098 97 ntBASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-1061P-201ENST00000516530 99 ntBASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 Y_RNA.712-201ENST00000517011 92 ntBASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 AL137067.1-201ENST00000615933 120 ntBASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
AMBRA1Q9C0C7 SNORD1A-201ENST00000364968 72 ntBASIC1.64□□□□□ -2.15
AMBRA1Q9C0C7 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-690P-201ENST00000365242 106 ntBASIC1.64□□□□□ -2.15
AMBRA1Q9C0C7 Y_RNA.563-201ENST00000384707 108 ntBASIC1.64□□□□□ -2.15
AMBRA1Q9C0C7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.64□□□□□ -2.15
AMBRA1Q9C0C7 RNU7-53P-201ENST00000516705 60 ntBASIC1.64□□□□□ -2.15
AMBRA1Q9C0C7 IGKV1-22-201ENST00000524313 326 ntBASIC1.64□□□□□ -2.15
AMBRA1Q9C0C7 MIR8063-201ENST00000621930 81 ntBASIC1.64□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-1290P-201ENST00000362957 109 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 Y_RNA.366-201ENST00000365540 102 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-772P-201ENST00000516042 105 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 SNORA31.4-201ENST00000516049 129 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-781P-201ENST00000516377 101 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 MIR3618-201ENST00000580330 88 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 HSPE1P19-201ENST00000603327 295 ntBASIC1.63□□□□□ -2.15
AMBRA1Q9C0C7 SNORD58C-201ENST00000365223 64 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 SNORA51.10-201ENST00000384418 136 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 MIR1263-201ENST00000408324 86 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 Y_RNA.630-201ENST00000411370 108 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 RNU7-73P-201ENST00000458743 63 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 AC005908.1-201ENST00000468701 347 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-922P-201ENST00000516753 99 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 MIR4255-201ENST00000579351 72 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 MIR3152-201ENST00000579801 74 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
AMBRA1Q9C0C7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 SNORD33-201ENST00000362761 85 ntBASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 BTF3P4-201ENST00000418852 495 ntBASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 snoU13.16-201ENST00000459350 104 ntBASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 AC008133.2-201ENST00000624540 351 ntBASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 MIR3914-2-201ENST00000637339 95 ntBASIC1.61□□□□□ -2.15
AMBRA1Q9C0C7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 MIR302D-201ENST00000362275 68 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 Y_RNA.346-201ENST00000365385 112 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 MIR489-201ENST00000384923 84 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 MIRLET7F2-201ENST00000385277 83 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 SNORD41-201ENST00000386967 70 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-1319P-201ENST00000390855 104 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-747P-201ENST00000390928 104 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms