Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU1-115P-201ENST00000365329 160 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 SNORA75B-201ENST00000384053 137 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU6-20P-201ENST00000384106 107 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 AC002542.1-201ENST00000440683 193 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU2-13P-201ENST00000515909 113 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU6-75P-201ENST00000515944 104 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 ACA59.1-201ENST00000515966 143 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU6-559P-201ENST00000516151 98 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.48□□□□□ -2.65
COL12A1Q99715 AC104072.1-201ENST00000568817 668 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.48□□□□□ -2.65
COL12A1Q99715 AP001836.1-201ENST00000604675 523 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 MRPS10P1-201ENST00000448483 130 ntBASIC-1.49□□□□□ -2.65
COL12A1Q99715 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.49□□□□□ -2.65
COL12A1Q99715 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.49□□□□□ -2.65
COL12A1Q99715 AC090616.2-202ENST00000584248 222 ntBASIC-1.49□□□□□ -2.65
COL12A1Q99715 AC021443.1-201ENST00000604478 211 ntBASIC-1.49□□□□□ -2.65
COL12A1Q99715 AC231657.1-201ENST00000624313 397 ntBASIC-1.49□□□□□ -2.65
COL12A1Q99715 MTCO3P19-201ENST00000415864 321 ntBASIC-1.49□□□□□ -2.65
COL12A1Q99715 MTND1P36-201ENST00000522384 936 ntBASIC-1.49□□□□□ -2.65
COL12A1Q99715 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 AC078809.1-201ENST00000427601 140 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.5□□□□□ -2.65
COL12A1Q99715 RNU7-181P-201ENST00000517234 74 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 AC109479.2-201ENST00000517842 174 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 AC021451.1-201ENST00000523498 1129 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.5□□□□□ -2.65
COL12A1Q99715 RNA5SP133-201ENST00000363368 119 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 MIR519E-201ENST00000385075 84 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 AC004866.1-201ENST00000411748 78 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 RNU6-830P-201ENST00000516353 107 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 U6.97-201ENST00000636904 101 ntBASIC-1.5□□□□□ -2.65
COL12A1Q99715 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 SNORA19.1-201ENST00000410656 129 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 RNU2-14P-201ENST00000411053 191 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 CYCSP46-201ENST00000423569 204 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 MTCO2P6-201ENST00000463134 685 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 AC103706.2-201ENST00000638080 240 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 RNU6-1284P-201ENST00000363701 100 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 RNU6-132P-201ENST00000383863 107 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 MIR519A2-201ENST00000384990 87 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 MIR520D-201ENST00000385002 87 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 SNORD65B-201ENST00000459126 73 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 MTND2P32-201ENST00000521584 1038 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 MTND1P24-201ENST00000552175 861 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 AC005520.4-201ENST00000604337 90 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 AC006435.5-201ENST00000624486 112 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 RNU6-278P-201ENST00000390945 109 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 AC096949.1-201ENST00000412047 152 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.51□□□□□ -2.65
COL12A1Q99715 AC026470.2-201ENST00000561492 181 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 FRG2DP-202ENST00000566967 323 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 U4.7-201ENST00000638126 106 ntBASIC-1.51□□□□□ -2.65
COL12A1Q99715 SNORA63.6-201ENST00000364921 119 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.52□□□□□ -2.65
COL12A1Q99715 AC124312.5-201ENST00000604451 268 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 MIR15A-201ENST00000607334 83 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 RNU6-136P-201ENST00000384663 107 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 MIR216B-201ENST00000390186 82 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 MIR548Q-201ENST00000408404 100 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.52□□□□□ -2.65
COL12A1Q99715 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.52□□□□□ -2.65
COL12A1Q99715 RNU6-238P-201ENST00000363313 106 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 RNU6-309P-201ENST00000364573 106 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 RNU6-167P-201ENST00000384292 106 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 RNU6-831P-201ENST00000384548 107 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
COL12A1Q99715 MIR548E-201ENST00000408287 88 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 MTCO2P11-201ENST00000431069 680 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.53□□□□□ -2.65
COL12A1Q99715 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.53□□□□□ -2.65
COL12A1Q99715 AC091133.4-201ENST00000511142 308 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 AC012467.1-201ENST00000607740 256 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 AL133215.3-201ENST00000609801 448 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 AC009159.2-201ENST00000617603 606 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 AC091931.1-201ENST00000623488 728 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 AC022418.1-201ENST00000624118 445 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 RNU6-682P-201ENST00000363843 106 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 MIR522-201ENST00000385071 87 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 AL590004.1-201ENST00000405321 300 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.53□□□□□ -2.65
COL12A1Q99715 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-1.53□□□□□ -2.65
COL12A1Q99715 AL009048.1-201ENST00000450437 298 ntBASIC-1.53□□□□□ -2.66
COL12A1Q99715 MTCO1P29-201ENST00000496868 288 ntBASIC-1.53□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms