Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 MIR6863-201ENST00000636112 90 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 RNU6-99P-201ENST00000364721 107 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 RNU6-900P-201ENST00000384498 102 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 MIR599-201ENST00000385069 95 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 SEPT14P3-201ENST00000439401 183 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 AL732372.2-207ENST00000445840 183 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 SEPT14P2-201ENST00000453405 183 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 SEPT14P4-201ENST00000513445 186 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 FO082796.1-201ENST00000523795 183 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 AC100767.1-201ENST00000528178 123 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 YWHAEP2-201ENST00000580066 112 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 MIR3662-201ENST00000637030 95 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 AC099654.14-201ENST00000638599 341 ntBASIC-1.2□□□□□ -2.6
AP1S3Q96PC3 SNORA22.1-201ENST00000362701 134 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 RNU6-451P-201ENST00000362921 107 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 RNA5SP368-201ENST00000364298 116 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 RNY3P4-201ENST00000384428 101 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 SNORD115-47-201ENST00000391226 86 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 AC009161.1-201ENST00000417306 376 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 MTND2P9-201ENST00000422293 931 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 AC093423.1-201ENST00000440817 142 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 AL500527.2-201ENST00000454105 95 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 IGKV1-22-201ENST00000524313 326 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 AL512360.1-201ENST00000555346 234 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 AC005014.3-201ENST00000605985 190 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 U4.1-201ENST00000620349 87 ntBASIC-1.21□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 RNU4-36P-201ENST00000364294 144 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 SNORD114-29-201ENST00000364819 70 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 RNU6-483P-201ENST00000384088 108 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 RN7SKP298-201ENST00000515950 94 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 RNU6-120P-201ENST00000516077 103 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 AP000676.1-201ENST00000533307 52 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 MIR548H5-201ENST00000580314 60 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 MIR548AG2-201ENST00000581228 64 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 AC090617.10-201ENST00000624308 134 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 AP000720.1-201ENST00000625091 483 ntBASIC-1.22□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 SNORD115-44-201ENST00000365391 82 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 RNU6-901P-201ENST00000384593 106 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 SNORD78.2-201ENST00000391076 69 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 AL050303.3-201ENST00000613704 284 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 AC069503.3-201ENST00000618674 145 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 AC091932.4-201ENST00000623386 200 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 TPTEP1-208ENST00000636884 213 ntBASIC-1.23□□□□□ -2.61
AP1S3Q96PC3 SNORD95.1-201ENST00000364099 68 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 RNY3P11-201ENST00000364153 102 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 RNU6-154P-201ENST00000384306 106 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 SNORA69.1-201ENST00000390904 137 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 snoU13.13-201ENST00000458842 104 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 MTND5P5-201ENST00000503764 376 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 RNU6-397P-201ENST00000516226 104 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 SNORA27.4-201ENST00000516650 95 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 AC145423.2-201ENST00000610631 239 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 Z69908.1-201ENST00000622603 247 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 MTND5P18-201ENST00000445624 1801 ntBASIC-1.24□□□□□ -2.61
AP1S3Q96PC3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.25□□□□□ -2.61
AP1S3Q96PC3 AC098614.3-201ENST00000438957 440 ntBASIC-1.25□□□□□ -2.61
AP1S3Q96PC3 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.25□□□□□ -2.61
AP1S3Q96PC3 MTND5P40-201ENST00000559945 246 ntBASIC-1.25□□□□□ -2.61
AP1S3Q96PC3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.25□□□□□ -2.61
AP1S3Q96PC3 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 MIR519E-201ENST00000385075 84 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 AC024067.1-201ENST00000426199 223 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 RNU6-365P-201ENST00000517113 106 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 RNU7-35P-201ENST00000517174 62 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 MIR4790-201ENST00000577799 79 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 MIR4662B-201ENST00000579498 81 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 AL162413.1-201ENST00000603198 110 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 AL359880.1-201ENST00000621879 266 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 AC021613.1-201ENST00000623880 111 ntBASIC-1.26□□□□□ -2.61
AP1S3Q96PC3 RNY3P3-201ENST00000363816 102 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms