Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 RNU6-388P-201ENST00000517012 105 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 RNU6-389P-201ENST00000517048 105 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 MRPS18CP4-201ENST00000535821 231 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 AL365205.2-201ENST00000594586 68 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 AL157834.3-201ENST00000615543 103 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 AC078938.1-201ENST00000620993 318 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 MIR6516-201ENST00000630554 81 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 U6.106-201ENST00000636360 105 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 RNU6-47P-201ENST00000383866 107 ntBASIC1.26□□□□□ -2.21
CCDC138Q96M89 RNU6-342P-201ENST00000384521 104 ntBASIC1.26□□□□□ -2.21
CCDC138Q96M89 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.26□□□□□ -2.21
CCDC138Q96M89 RNU7-96P-201ENST00000459535 64 ntBASIC1.26□□□□□ -2.21
CCDC138Q96M89 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
CCDC138Q96M89 Y_RNA.274-201ENST00000364714 101 ntBASIC1.25□□□□□ -2.21
CCDC138Q96M89 Y_RNA.297-201ENST00000364950 91 ntBASIC1.25□□□□□ -2.21
CCDC138Q96M89 MIR598-201ENST00000384868 97 ntBASIC1.25□□□□□ -2.21
CCDC138Q96M89 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
CCDC138Q96M89 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
CCDC138Q96M89 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC138Q96M89 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC138Q96M89 RNU6-978P-201ENST00000364371 103 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 SNORA40.6-201ENST00000391153 128 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 RNU6-613P-201ENST00000410412 108 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 AL138752.1-201ENST00000452964 351 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 Y_RNA.644-201ENST00000459006 113 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 RNU6-998P-201ENST00000515894 101 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 Y_RNA.674-201ENST00000516362 113 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 AC131055.1-201ENST00000584626 316 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 AC091895.1-201ENST00000624494 256 ntBASIC1.24□□□□□ -2.21
CCDC138Q96M89 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC138Q96M89 Y_RNA.233-201ENST00000364407 101 ntBASIC1.23□□□□□ -2.21
CCDC138Q96M89 RNU6-312P-201ENST00000364629 107 ntBASIC1.23□□□□□ -2.21
CCDC138Q96M89 SNORD114-24-201ENST00000365029 72 ntBASIC1.23□□□□□ -2.21
CCDC138Q96M89 AC023827.1-201ENST00000569247 97 ntBASIC1.23□□□□□ -2.21
CCDC138Q96M89 MIR4431-201ENST00000579990 94 ntBASIC1.23□□□□□ -2.21
CCDC138Q96M89 MIR5197-201ENST00000583721 112 ntBASIC1.23□□□□□ -2.21
CCDC138Q96M89 MIR6078-201ENST00000611069 100 ntBASIC1.23□□□□□ -2.21
CCDC138Q96M89 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC138Q96M89 Y_RNA.178-201ENST00000363832 102 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 SNORD113.3-201ENST00000364630 78 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 RNU6-200P-201ENST00000364743 107 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 Y_RNA.351-201ENST00000365436 96 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 MT-TN-201ENST00000387400 73 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 SNORD111-201ENST00000408139 94 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 Y_RNA.793-201ENST00000411222 111 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 AC006461.1-201ENST00000412637 326 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC138Q96M89 RNU7-80P-201ENST00000459562 61 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 AC036111.3-201ENST00000526389 112 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 AC072026.1-201ENST00000605023 201 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 AC106800.4-201ENST00000614905 153 ntBASIC1.22□□□□□ -2.21
CCDC138Q96M89 Y_RNA.205-201ENST00000364128 113 ntBASIC1.21□□□□□ -2.22
CCDC138Q96M89 RNU6-654P-201ENST00000364373 107 ntBASIC1.21□□□□□ -2.22
CCDC138Q96M89 SNORA25.7-201ENST00000364375 127 ntBASIC1.21□□□□□ -2.22
CCDC138Q96M89 RNU6-913P-201ENST00000390913 95 ntBASIC1.21□□□□□ -2.22
CCDC138Q96M89 RNU2-11P-201ENST00000459191 187 ntBASIC1.21□□□□□ -2.22
CCDC138Q96M89 SNORD124-201ENST00000459577 104 ntBASIC1.21□□□□□ -2.22
CCDC138Q96M89 AP000753.3-201ENST00000604083 169 ntBASIC1.21□□□□□ -2.22
CCDC138Q96M89 MIR8055-201ENST00000610739 97 ntBASIC1.21□□□□□ -2.22
CCDC138Q96M89 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC138Q96M89 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC138Q96M89 MIR302B-201ENST00000362188 73 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 MIR342-201ENST00000362212 99 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 Y_RNA.521-201ENST00000384560 114 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 RNA5SP127-201ENST00000411051 133 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 AC022709.1-201ENST00000615967 87 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 AC012676.2-201ENST00000619258 186 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 MIR376A2-201ENST00000636782 80 ntBASIC1.2□□□□□ -2.22
CCDC138Q96M89 Y_RNA.257-201ENST00000364596 102 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 Y_RNA.454-201ENST00000384224 113 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 SNORA2B-201ENST00000384583 137 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 SNORD38B-201ENST00000384690 67 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 MIR624-201ENST00000385217 97 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 MIR942-201ENST00000401111 86 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 MIR548I3-201ENST00000408378 149 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 FABP5P4-201ENST00000437203 171 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 RNU6-1219P-201ENST00000516143 112 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 Y_RNA.700-201ENST00000516806 100 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC138Q96M89 MIR4264-201ENST00000583520 66 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 AL020996.3-201ENST00000606617 222 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 SNORD38B-202ENST00000625943 69 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 Z97988.1-201ENST00000637697 135 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 AL391516.1-201ENST00000554380 2449 ntBASIC1.19□□□□□ -2.22
CCDC138Q96M89 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CCDC138Q96M89 Y_RNA.168-201ENST00000363740 102 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 SNORA1.1-201ENST00000364671 133 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 RNU6-53P-201ENST00000365367 106 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 RNU6-125P-201ENST00000384505 107 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 SEPT7P4-201ENST00000437076 306 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 RNU6-138P-201ENST00000515952 107 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 AC022559.1-201ENST00000520905 205 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 AP002392.1-201ENST00000537692 208 ntBASIC1.18□□□□□ -2.22
CCDC138Q96M89 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms