Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM47Q96LD4 RNU1-23P-201ENST00000363361 144 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 SNORD115-31-201ENST00000365318 82 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 RNU6-1241P-201ENST00000384536 107 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 RNA5SP21-201ENST00000410917 96 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 RNU6-1086P-201ENST00000410930 100 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 STAG3L5P-204ENST00000443759 179 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 ATP5J2P3-201ENST00000451550 258 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 AC005520.4-201ENST00000604337 90 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 AC245060.5-201ENST00000610778 3293 ntBASIC3.2□□□□□ -1.9
TRIM47Q96LD4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM47Q96LD4 MIRLET7C-201ENST00000362160 84 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 Y_RNA.98-201ENST00000363109 102 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 SNORA24-201ENST00000384096 131 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 MIR512-1-201ENST00000384913 84 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 MIR154-201ENST00000385243 84 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-447P-201ENST00000410293 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-1118P-201ENST00000410382 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-1076P-201ENST00000410397 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-355P-201ENST00000410427 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-791P-201ENST00000410467 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-705P-201ENST00000410601 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-1100P-201ENST00000410691 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RN7SKP123-201ENST00000410732 291 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-860P-201ENST00000410860 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-602P-201ENST00000411155 105 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-1217P-201ENST00000411276 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU6-785P-201ENST00000411324 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU7-137P-201ENST00000516788 62 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 RNU7-156P-201ENST00000517214 74 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM47Q96LD4 AL512598.1-201ENST00000610158 273 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 U6.90-201ENST00000614007 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 U6.70-201ENST00000620287 104 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 AC027279.3-201ENST00000625055 122 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 AC110079.1-202ENST00000635213 138 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 AP006437.1-201ENST00000641440 3685 ntBASIC3.19□□□□□ -1.9
TRIM47Q96LD4 ZNF658B-202ENST00000615961 3375 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM47Q96LD4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TRIM47Q96LD4 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 SNORD114-10-201ENST00000363409 72 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 MIR520H-201ENST00000385126 88 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 SNORD77.2-201ENST00000391045 68 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 CST2P1-201ENST00000425770 87 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 HMGN1P33-201ENST00000432945 451 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 RNU7-73P-201ENST00000458743 63 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 MIR8066-201ENST00000617280 78 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 AP001362.1-201ENST00000625165 124 ntBASIC3.18□□□□□ -1.9
TRIM47Q96LD4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM47Q96LD4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM47Q96LD4 RNU6-614P-201ENST00000384369 107 ntBASIC3.17□□□□□ -1.9
TRIM47Q96LD4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM47Q96LD4 RNU7-79P-201ENST00000516082 62 ntBASIC3.17□□□□□ -1.9
TRIM47Q96LD4 RNU6-303P-201ENST00000517091 106 ntBASIC3.17□□□□□ -1.9
TRIM47Q96LD4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM47Q96LD4 U6.59-201ENST00000615686 107 ntBASIC3.17□□□□□ -1.9
TRIM47Q96LD4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM47Q96LD4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM47Q96LD4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM47Q96LD4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM47Q96LD4 RNU1-105P-201ENST00000363470 161 ntBASIC3.16□□□□□ -1.9
TRIM47Q96LD4 RNA5SP292-201ENST00000390974 118 ntBASIC3.16□□□□□ -1.9
TRIM47Q96LD4 RNU2-48P-201ENST00000410694 191 ntBASIC3.16□□□□□ -1.9
TRIM47Q96LD4 AC074348.1-201ENST00000426503 132 ntBASIC3.16□□□□□ -1.9
TRIM47Q96LD4 RN7SL636P-201ENST00000497504 294 ntBASIC3.16□□□□□ -1.9
TRIM47Q96LD4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM47Q96LD4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.15□□□□□ -1.9
TRIM47Q96LD4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM47Q96LD4 RNU6-811P-201ENST00000384069 107 ntBASIC3.15□□□□□ -1.91
TRIM47Q96LD4 MIR592-201ENST00000384959 97 ntBASIC3.15□□□□□ -1.91
TRIM47Q96LD4 AC007336.1-201ENST00000576365 3828 ntBASIC3.15□□□□□ -1.91
TRIM47Q96LD4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM47Q96LD4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM47Q96LD4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM47Q96LD4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM47Q96LD4 HSBP1P2-201ENST00000299671 229 ntBASIC3.14□□□□□ -1.91
TRIM47Q96LD4 Y_RNA.264-201ENST00000364665 102 ntBASIC3.14□□□□□ -1.91
TRIM47Q96LD4 MIR516B2-201ENST00000385190 85 ntBASIC3.14□□□□□ -1.91
TRIM47Q96LD4 RNA5SP109-201ENST00000391010 116 ntBASIC3.14□□□□□ -1.91
TRIM47Q96LD4 SNORD88.1-201ENST00000408684 91 ntBASIC3.14□□□□□ -1.91
TRIM47Q96LD4 AC243994.1-201ENST00000618627 109 ntBASIC3.14□□□□□ -1.91
TRIM47Q96LD4 RNU6-862P-201ENST00000362804 105 ntBASIC3.13□□□□□ -1.91
TRIM47Q96LD4 SNORD114-6-201ENST00000364393 72 ntBASIC3.13□□□□□ -1.91
TRIM47Q96LD4 MIR218-1-201ENST00000384999 110 ntBASIC3.13□□□□□ -1.91
TRIM47Q96LD4 AC244636.1-201ENST00000421152 228 ntBASIC3.13□□□□□ -1.91
TRIM47Q96LD4 AC003982.1-202ENST00000469928 248 ntBASIC3.13□□□□□ -1.91
TRIM47Q96LD4 SNORA18.5-201ENST00000516616 101 ntBASIC3.13□□□□□ -1.91
TRIM47Q96LD4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM47Q96LD4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM47Q96LD4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM47Q96LD4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
TRIM47Q96LD4 RNU6-208P-201ENST00000362431 107 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 RNU6-205P-201ENST00000390858 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms