Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 SNORD93-201ENST00000408813 74 ntBASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 RNU4-83P-201ENST00000410863 133 ntBASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 AL512326.2-201ENST00000426359 151 ntBASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 AF228730.3-201ENST00000436691 102 ntBASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 RNU6-469P-201ENST00000516253 101 ntBASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 AC090574.1-201ENST00000623186 233 ntBASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 AC112487.2-201ENST00000637950 304 ntBASIC-0.01□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 RNU6-875P-201ENST00000516488 106 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 RNA5SP268-201ENST00000516828 124 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 AL109933.3-201ENST00000619095 188 ntBASIC-0.02□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 RNA5SP214-201ENST00000363378 118 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 RNA5SP325-201ENST00000363756 130 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 MIR644A-201ENST00000385262 94 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 SNORA26.6-201ENST00000391256 115 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 SEPT7P4-201ENST00000437076 306 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 RNU6-897P-201ENST00000517135 105 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 AP001282.2-201ENST00000616149 309 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 MIR6717-201ENST00000622747 73 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
PKNOX2Q96KN3 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 RNY3P1-201ENST00000365085 102 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 RNU6-290P-201ENST00000365212 101 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 SNORA26-201ENST00000391286 122 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 MIR5190-201ENST00000581537 80 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 MIR4305-201ENST00000583252 102 ntBASIC-0.04□□□□□ -2.42
PKNOX2Q96KN3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 RNA5SP457-201ENST00000363657 124 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 RNU6-326P-201ENST00000365480 107 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 RNU6-662P-201ENST00000384253 104 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 RNA5SP261-201ENST00000410536 106 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 RPL39P25-201ENST00000449384 154 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 RNU6-507P-201ENST00000516045 100 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 AC006006.1-201ENST00000603082 144 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 AL008718.3-201ENST00000610217 321 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 AL662814.1-201ENST00000617364 121 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 uc_338.22-201ENST00000622722 187 ntBASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
PKNOX2Q96KN3 MIR302B-201ENST00000362188 73 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 MIR342-201ENST00000362212 99 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 SNORA25.1-201ENST00000362326 128 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 RNU6-653P-201ENST00000363074 106 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 RNU4-10P-201ENST00000364383 140 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 RNU6-514P-201ENST00000384208 107 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 RNU2-55P-201ENST00000411146 174 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 AC069271.1-201ENST00000445577 156 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 MTND4P19-201ENST00000446659 478 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 RNA5SP227-201ENST00000516184 113 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 AC037487.3-201ENST00000606668 112 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 MIR7107-201ENST00000611489 80 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 MIR6755-201ENST00000619993 66 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 snoU18.1-201ENST00000629629 71 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 MIR6828-201ENST00000636181 60 ntBASIC-0.06□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 SNORA53-201ENST00000391141 249 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 RNA5SP237-201ENST00000410414 113 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 RNU6-121P-201ENST00000410525 99 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 AL731563.1-201ENST00000442202 214 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 SNORA27.4-201ENST00000516650 95 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 RNU6-135P-201ENST00000516769 101 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 AC104408.1-201ENST00000605241 170 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 MIR6082-201ENST00000613604 109 ntBASIC-0.07□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 SNORA8.3-201ENST00000384679 139 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 U8.15-201ENST00000390947 134 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 RNU6-823P-201ENST00000391042 103 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 MIR1252-201ENST00000408861 65 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 255.9 ms