Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNU2-35P-201ENST00000516446 142 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 MIR3683-201ENST00000580847 82 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 MIR424-201ENST00000362227 98 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1104P-201ENST00000384723 104 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 MT-TI-201ENST00000387365 69 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 SNORD123-201ENST00000459473 70 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 RNU6-958P-201ENST00000516995 106 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 AC022523.2-201ENST00000561045 150 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 MIR7974-201ENST00000615835 79 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 AL035470.1-201ENST00000622571 220 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 AL589743.1-201ENST00000551932 2712 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 RNU6-457P-201ENST00000363999 107 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 SNORA70.7-201ENST00000384159 133 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 RNU6-106P-201ENST00000384405 107 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 RNU6-360P-201ENST00000390944 104 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 RNU7-45P-201ENST00000459460 63 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 SNORA31.4-201ENST00000516049 129 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 RNU2-19P-201ENST00000517288 84 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 MIR548AR-201ENST00000582191 57 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 FAM106DP-201ENST00000586416 501 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 AC021613.1-201ENST00000623880 111 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.362-201ENST00000365518 110 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 SNORD28B-201ENST00000390993 75 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP89-201ENST00000410300 108 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP144-201ENST00000410846 116 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 AL022718.1-201ENST00000412004 84 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RPS29P29-201ENST00000456396 171 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNU6-168P-201ENST00000516189 101 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP61-201ENST00000516453 100 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP276-201ENST00000362580 94 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.49-201ENST00000362714 112 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR504-201ENST00000385065 83 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 U8.13-201ENST00000390842 128 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 RNU6-554P-201ENST00000410466 106 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AL512326.2-201ENST00000426359 151 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC055731.1-201ENST00000474387 401 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 RNU7-53P-201ENST00000516705 60 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR4255-201ENST00000579351 72 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR4287-201ENST00000579398 78 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR3163-201ENST00000581592 73 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC243994.1-201ENST00000618627 109 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC106754.2-201ENST00000623006 233 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1014P-201ENST00000383940 103 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-32P-201ENST00000383948 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-203P-201ENST00000384038 104 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-13P-201ENST00000384248 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.495-201ENST00000384435 112 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-12P-201ENST00000384604 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-41P-201ENST00000384741 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 MIR548D2-201ENST00000384955 97 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 MIR1302-5-201ENST00000408164 150 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU7-6P-201ENST00000516845 62 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 MIR3152-201ENST00000579801 74 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 MIR7843-201ENST00000622274 79 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1298P-201ENST00000362456 101 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.163-201ENST00000363702 113 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.344-201ENST00000365381 112 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-747P-201ENST00000390928 104 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-241P-201ENST00000391148 104 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-177P-201ENST00000411257 104 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RPL39P34-201ENST00000477141 156 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 SNORA74.3-201ENST00000517108 154 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 AC004812.1-201ENST00000540773 146 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 MIR4791-201ENST00000607666 84 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.531-201ENST00000384589 121 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 POLR2J4-204ENST00000418424 324 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 RPL23AP6-201ENST00000446637 472 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 RNU2-13P-201ENST00000515909 113 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 RNU6-970P-201ENST00000516312 107 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 RNA5SP170-201ENST00000517150 101 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 U8.6-201ENST00000364939 135 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 Y_RNA.309-201ENST00000365046 111 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 Y_RNA.323-201ENST00000365157 109 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 RNU6-756P-201ENST00000383997 107 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 SNORA24-201ENST00000384096 131 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 295.1 ms