Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MIR3683-201ENST00000580847 82 ntBASIC2.08□□□□□ -2.08
SHDQ96IW2 snoU13.31-201ENST00000607291 104 ntBASIC2.08□□□□□ -2.08
SHDQ96IW2 AC025166.1-201ENST00000612411 163 ntBASIC2.08□□□□□ -2.08
SHDQ96IW2 AC021613.1-201ENST00000623880 111 ntBASIC2.08□□□□□ -2.08
SHDQ96IW2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHDQ96IW2 MIR378A-201ENST00000362177 66 ntBASIC2.07□□□□□ -2.08
SHDQ96IW2 Y_RNA.273-201ENST00000364703 102 ntBASIC2.07□□□□□ -2.08
SHDQ96IW2 MIR1263-201ENST00000408324 86 ntBASIC2.07□□□□□ -2.08
SHDQ96IW2 AC005908.1-201ENST00000468701 347 ntBASIC2.07□□□□□ -2.08
SHDQ96IW2 AC008834.1-201ENST00000511612 175 ntBASIC2.07□□□□□ -2.08
SHDQ96IW2 MIR3937-201ENST00000580135 106 ntBASIC2.07□□□□□ -2.08
SHDQ96IW2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
SHDQ96IW2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
SHDQ96IW2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHDQ96IW2 RNU4-16P-201ENST00000364737 141 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 SNORD1A-201ENST00000364968 72 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 SNORD41-201ENST00000386967 70 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 MIR759-201ENST00000390224 91 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 RNU6-1319P-201ENST00000390855 104 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 RNU6-747P-201ENST00000390928 104 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 RNU6-241P-201ENST00000391148 104 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 RNU6-177P-201ENST00000411257 104 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 AL022718.1-201ENST00000412004 84 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 RNU7-164P-201ENST00000459221 62 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 RNU6-781P-201ENST00000516377 101 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 RNU6-250P-201ENST00000516958 103 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.06□□□□□ -2.08
SHDQ96IW2 MIR4305-201ENST00000583252 102 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 MIR4251-201ENST00000635819 61 ntBASIC2.06□□□□□ -2.08
SHDQ96IW2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.05□□□□□ -2.08
SHDQ96IW2 RPL30P7-201ENST00000479312 323 ntBASIC2.05□□□□□ -2.08
SHDQ96IW2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.05□□□□□ -2.08
SHDQ96IW2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.05□□□□□ -2.08
SHDQ96IW2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.05□□□□□ -2.08
SHDQ96IW2 AL020996.3-201ENST00000606617 222 ntBASIC2.05□□□□□ -2.08
SHDQ96IW2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SHDQ96IW2 MIR302D-201ENST00000362275 68 ntBASIC2.04□□□□□ -2.08
SHDQ96IW2 RNU6-1290P-201ENST00000362957 109 ntBASIC2.04□□□□□ -2.08
SHDQ96IW2 Y_RNA.525-201ENST00000384570 113 ntBASIC2.04□□□□□ -2.08
SHDQ96IW2 Y_RNA.528-201ENST00000384575 108 ntBASIC2.04□□□□□ -2.08
SHDQ96IW2 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
SHDQ96IW2 COX6CP6-201ENST00000490840 228 ntBASIC2.04□□□□□ -2.08
SHDQ96IW2 AC019176.1-201ENST00000518519 225 ntBASIC2.04□□□□□ -2.08
SHDQ96IW2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SHDQ96IW2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SHDQ96IW2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SHDQ96IW2 SNORA1.1-201ENST00000364671 133 ntBASIC2.03□□□□□ -2.08
SHDQ96IW2 Y_RNA.298-201ENST00000364960 107 ntBASIC2.03□□□□□ -2.08
SHDQ96IW2 RNU6-1056P-201ENST00000383996 107 ntBASIC2.03□□□□□ -2.08
SHDQ96IW2 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
SHDQ96IW2 IGKV1-22-201ENST00000524313 326 ntBASIC2.03□□□□□ -2.08
SHDQ96IW2 MIR4422-201ENST00000581938 83 ntBASIC2.03□□□□□ -2.08
SHDQ96IW2 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
SHDQ96IW2 AL121890.5-201ENST00000620848 304 ntBASIC2.03□□□□□ -2.08
SHDQ96IW2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
SHDQ96IW2 Y_RNA.213-201ENST00000364178 111 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 MIRLET7F2-201ENST00000385277 83 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 RNU6-735P-201ENST00000410612 107 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.02□□□□□ -2.09
SHDQ96IW2 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 RNU7-41P-201ENST00000515917 61 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 RNU6-947P-201ENST00000516264 106 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 SNORA25.15-201ENST00000516487 89 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 RNY4P20-201ENST00000516678 93 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 HSPE1P19-201ENST00000603327 295 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 AL670379.3-201ENST00000605040 251 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 MIR7111-201ENST00000619751 72 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.02□□□□□ -2.09
SHDQ96IW2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SHDQ96IW2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.02□□□□□ -2.09
SHDQ96IW2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHDQ96IW2 MTND5P18-201ENST00000445624 1801 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SHDQ96IW2 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 Y_RNA.354-201ENST00000365448 111 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 MIR548A3-201ENST00000385297 97 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 RNU6-913P-201ENST00000390913 95 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 RNA5SP144-201ENST00000410846 116 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 RPS3AP1-201ENST00000413190 320 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 AC027119.1-201ENST00000440877 241 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 CYP3A52P-201ENST00000563326 91 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 SNRPGP19-201ENST00000603826 189 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 MIR6717-201ENST00000622747 73 ntBASIC2.01□□□□□ -2.09
SHDQ96IW2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHDQ96IW2 RNY1P10-201ENST00000363268 113 ntBASIC2□□□□□ -2.09
SHDQ96IW2 Y_RNA.430-201ENST00000384081 110 ntBASIC2□□□□□ -2.09
SHDQ96IW2 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
SHDQ96IW2 MIR934-201ENST00000401241 83 ntBASIC2□□□□□ -2.09
SHDQ96IW2 RNU6-1064P-201ENST00000410626 104 ntBASIC2□□□□□ -2.09
SHDQ96IW2 Y_RNA.630-201ENST00000411370 108 ntBASIC2□□□□□ -2.09
SHDQ96IW2 RNU7-45P-201ENST00000459460 63 ntBASIC2□□□□□ -2.09
SHDQ96IW2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHDQ96IW2 SNORA22.1-201ENST00000362701 134 ntBASIC1.99□□□□□ -2.09
SHDQ96IW2 RNA5SP190-201ENST00000365222 118 ntBASIC1.99□□□□□ -2.09
SHDQ96IW2 RNU6-476P-201ENST00000384726 107 ntBASIC1.99□□□□□ -2.09
SHDQ96IW2 RNU1-78P-201ENST00000391248 165 ntBASIC1.99□□□□□ -2.09
SHDQ96IW2 RNU7-123P-201ENST00000515911 60 ntBASIC1.99□□□□□ -2.09
SHDQ96IW2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.99□□□□□ -2.09
SHDQ96IW2 MTND5P34-201ENST00000568888 325 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 1435 ms