Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
CTHRC1Q96CG8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CTHRC1Q96CG8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
CTHRC1Q96CG8 RNY1P6-201ENST00000384193 109 ntBASIC1.5□□□□□ -2.17
CTHRC1Q96CG8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.5□□□□□ -2.17
CTHRC1Q96CG8 RNA5SP261-201ENST00000410536 106 ntBASIC1.5□□□□□ -2.17
CTHRC1Q96CG8 MIR3152-201ENST00000579801 74 ntBASIC1.5□□□□□ -2.17
CTHRC1Q96CG8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
CTHRC1Q96CG8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 Y_RNA.114-201ENST00000363265 113 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 Y_RNA.140-201ENST00000363474 103 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 Y_RNA.164-201ENST00000363709 102 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 RNA5SP48-201ENST00000363969 126 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 RNU6-647P-201ENST00000364243 107 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 RNU6-959P-201ENST00000384671 107 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 RNU7-73P-201ENST00000458743 63 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 RNU6-971P-201ENST00000516920 106 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 MIR3664-201ENST00000579074 99 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 MIR4251-201ENST00000635819 61 ntBASIC1.49□□□□□ -2.17
CTHRC1Q96CG8 AL133373.1-201ENST00000497098 94 ntBASIC1.48□□□□□ -2.17
CTHRC1Q96CG8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.48□□□□□ -2.17
CTHRC1Q96CG8 AP000942.3-201ENST00000603702 160 ntBASIC1.48□□□□□ -2.17
CTHRC1Q96CG8 AL121890.5-201ENST00000620848 304 ntBASIC1.48□□□□□ -2.17
CTHRC1Q96CG8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 RNU6-508P-201ENST00000363231 103 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 RNU6-690P-201ENST00000365242 106 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 RNU6-1117P-201ENST00000384525 104 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 AL606753.1-201ENST00000427435 87 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 AL158147.1-201ENST00000443970 75 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 RNU6-893P-201ENST00000458841 100 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 Y_RNA.651-201ENST00000459380 103 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 RNU7-41P-201ENST00000515917 61 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 RNU6-62P-201ENST00000516526 102 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.47□□□□□ -2.17
CTHRC1Q96CG8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 RNU6-349P-201ENST00000362402 107 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 RNU6-80P-201ENST00000384195 107 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 AC108667.1-201ENST00000428618 249 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 RNU6-970P-201ENST00000516312 107 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 AL096861.1-201ENST00000610899 123 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 U2.22-201ENST00000636441 106 ntBASIC1.46□□□□□ -2.18
CTHRC1Q96CG8 Y_RNA.4-201ENST00000362333 112 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 RNU6-1319P-201ENST00000390855 104 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 RNU6-747P-201ENST00000390928 104 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 RNU6-241P-201ENST00000391148 104 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 RNU6-177P-201ENST00000411257 104 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 AC108729.3-201ENST00000513484 108 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 RNU6-240P-201ENST00000516098 97 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 AC133485.4-201ENST00000561835 220 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 AC138907.4-201ENST00000570107 226 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 MIR3192-201ENST00000584920 77 ntBASIC1.45□□□□□ -2.18
CTHRC1Q96CG8 SNORA19-201ENST00000384737 128 ntBASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 RN7SKP179-201ENST00000516126 217 ntBASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 BX248123.2-201ENST00000606318 124 ntBASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 AL137067.1-201ENST00000615933 120 ntBASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 AC021613.1-201ENST00000623880 111 ntBASIC1.44□□□□□ -2.18
CTHRC1Q96CG8 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 AL157777.2-201ENST00000258070 137 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 RNU6-235P-201ENST00000362644 107 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 Y_RNA.71-201ENST00000362892 104 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 SNORA1.1-201ENST00000364671 133 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 RNU6-913P-201ENST00000390913 95 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 RPS3AP1-201ENST00000413190 320 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 AC008267.6-201ENST00000441664 139 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 AL020996.3-201ENST00000606617 222 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 MIR8055-201ENST00000610739 97 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 MIR6717-201ENST00000622747 73 ntBASIC1.43□□□□□ -2.18
CTHRC1Q96CG8 SNORD113-1-201ENST00000365321 69 ntBASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 AC009474.2-201ENST00000451383 136 ntBASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 RNU6-1053P-201ENST00000515930 101 ntBASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 RN7SKP19-201ENST00000516016 252 ntBASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 CYP3A52P-201ENST00000563326 91 ntBASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 MIR548AO-201ENST00000579992 96 ntBASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 HSPE1P19-201ENST00000603327 295 ntBASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 AC021443.1-201ENST00000604478 211 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 331.2 ms