Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.49□□□□□ -2.33
VPS33AQ96AX1 MIR125B2-201ENST00000385128 89 ntBASIC0.49□□□□□ -2.33
VPS33AQ96AX1 RNU7-185P-201ENST00000459215 60 ntBASIC0.49□□□□□ -2.33
VPS33AQ96AX1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.49□□□□□ -2.33
VPS33AQ96AX1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.49□□□□□ -2.33
VPS33AQ96AX1 MIR8062-201ENST00000621515 85 ntBASIC0.49□□□□□ -2.33
VPS33AQ96AX1 MIR302B-201ENST00000362188 73 ntBASIC0.48□□□□□ -2.33
VPS33AQ96AX1 Y_RNA.7-201ENST00000362352 102 ntBASIC0.48□□□□□ -2.33
VPS33AQ96AX1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
VPS33AQ96AX1 RNU6-342P-201ENST00000384521 104 ntBASIC0.48□□□□□ -2.33
VPS33AQ96AX1 RNU6-381P-201ENST00000391259 108 ntBASIC0.48□□□□□ -2.33
VPS33AQ96AX1 MIR1302-6-201ENST00000408466 90 ntBASIC0.48□□□□□ -2.33
VPS33AQ96AX1 RNU6-635P-201ENST00000516651 102 ntBASIC0.48□□□□□ -2.33
VPS33AQ96AX1 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
VPS33AQ96AX1 AL365265.1-201ENST00000621045 234 ntBASIC0.48□□□□□ -2.33
VPS33AQ96AX1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
VPS33AQ96AX1 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU4-17P-201ENST00000365598 141 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-364P-201ENST00000384387 107 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-747P-201ENST00000390928 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-241P-201ENST00000391148 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 SNORA79-201ENST00000408376 140 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 SNORD100-201ENST00000408573 76 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-447P-201ENST00000410293 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-355P-201ENST00000410427 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-791P-201ENST00000410467 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-705P-201ENST00000410601 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-860P-201ENST00000410860 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-651P-201ENST00000411040 105 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-785P-201ENST00000411324 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU7-80P-201ENST00000459562 61 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 RNU6-453P-201ENST00000516819 85 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 AC090897.1-201ENST00000580909 226 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 MIR5197-201ENST00000583721 112 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 SNORD92-201ENST00000585078 85 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 U6.90-201ENST00000614007 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 U6.70-201ENST00000620287 104 ntBASIC0.47□□□□□ -2.33
VPS33AQ96AX1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.46□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.46□□□□□ -2.34
VPS33AQ96AX1 SNORA1-201ENST00000384107 130 ntBASIC0.46□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.46□□□□□ -2.34
VPS33AQ96AX1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
VPS33AQ96AX1 SNORA26.6-201ENST00000391256 115 ntBASIC0.46□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.720-201ENST00000517166 92 ntBASIC0.46□□□□□ -2.34
VPS33AQ96AX1 MIR6717-201ENST00000622747 73 ntBASIC0.46□□□□□ -2.34
VPS33AQ96AX1 MIR30D-201ENST00000362283 70 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 RNU6-103P-201ENST00000363686 107 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 RNU6-728P-201ENST00000365375 104 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 SNORD114-22-201ENST00000365423 72 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.461-201ENST00000384263 103 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 SNORD12C-201ENST00000386307 89 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 MIR1276-201ENST00000408707 83 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 RNU4-43P-201ENST00000410628 137 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 RNU7-102P-201ENST00000458948 62 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.638-201ENST00000459374 113 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS33AQ96AX1 AC006504.6-201ENST00000590142 199 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 AL162730.1-201ENST00000605734 292 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 MIR6504-201ENST00000613520 61 ntBASIC0.45□□□□□ -2.34
VPS33AQ96AX1 MIR342-201ENST00000362212 99 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 RNU6-653P-201ENST00000363074 106 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.483-201ENST00000384380 101 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.512-201ENST00000384518 102 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS33AQ96AX1 RPS29P1-201ENST00000465274 159 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 RNU6-1153P-201ENST00000516760 105 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 AL442663.2-201ENST00000554385 511 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 AL365205.2-201ENST00000594586 68 ntBASIC0.44□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.574-201ENST00000384766 95 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 MT-TW-201ENST00000387382 68 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.618-201ENST00000410949 107 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 RNU7-156P-201ENST00000517214 74 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 MIR3129-201ENST00000581095 76 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
VPS33AQ96AX1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
VPS33AQ96AX1 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
VPS33AQ96AX1 Y_RNA.191-201ENST00000363972 113 ntBASIC0.42□□□□□ -2.34
VPS33AQ96AX1 RNU6-1160P-201ENST00000384546 104 ntBASIC0.42□□□□□ -2.34
VPS33AQ96AX1 MIR548F4-201ENST00000408515 105 ntBASIC0.42□□□□□ -2.34
VPS33AQ96AX1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
VPS33AQ96AX1 MTATP8P1-201ENST00000467115 207 ntBASIC0.42□□□□□ -2.34
VPS33AQ96AX1 AC002350.1-201ENST00000490759 375 ntBASIC0.42□□□□□ -2.34
VPS33AQ96AX1 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
VPS33AQ96AX1 AP003072.1-201ENST00000531740 145 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms