Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SNORA63C-201ENST00000364578 129 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 Y_RNA.634-201ENST00000364811 113 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 SNORA33.2-201ENST00000365413 134 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 MT-TT-201ENST00000387460 66 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 RNU6-651P-201ENST00000411040 105 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 RNU2-55P-201ENST00000411146 174 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 RNU6-602P-201ENST00000411155 105 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 MIR18B-201ENST00000454574 71 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.32□□□□□ -2.36
RNF139Q8WU17 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.32□□□□□ -2.36
RNF139Q8WU17 SNORD2.1-201ENST00000458762 69 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 RNU6-998P-201ENST00000515894 101 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 RNU6-570P-201ENST00000517051 105 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
RNF139Q8WU17 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.32□□□□□ -2.36
RNF139Q8WU17 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.31□□□□□ -2.36
RNF139Q8WU17 snoU2_19.4-201ENST00000364329 80 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 RNU6-740P-201ENST00000364734 105 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 Y_RNA.440-201ENST00000384120 114 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 MIR588-201ENST00000384900 83 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 MIR563-201ENST00000385080 79 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 RNU6-1165P-201ENST00000410119 107 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 AL138752.1-201ENST00000452964 351 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 SNRPGP8-201ENST00000454064 226 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 snoU13.2-201ENST00000459201 104 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 RNU7-96P-201ENST00000459535 64 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 RNU6-1299P-201ENST00000516316 100 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 Y_RNA.701-201ENST00000516812 110 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.31□□□□□ -2.36
RNF139Q8WU17 AL356055.1-201ENST00000602528 446 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 AC097639.2-201ENST00000603159 172 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
RNF139Q8WU17 Y_RNA.44-201ENST00000362676 108 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 RNU6-797P-201ENST00000363101 109 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 RNU6-1309P-201ENST00000363305 108 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 Y_RNA.237-201ENST00000364439 102 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 SNORA1.1-201ENST00000364671 133 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 Y_RNA.410-201ENST00000383992 113 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 RNY3P5-201ENST00000384127 102 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 SNORD12C-201ENST00000386307 89 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 SNORD77.3-201ENST00000391113 65 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 RNU6-1109P-201ENST00000391187 107 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 MIR938-201ENST00000401216 83 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
RNF139Q8WU17 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.3□□□□□ -2.36
RNF139Q8WU17 RNU2-11P-201ENST00000459191 187 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 RNA5SP153-201ENST00000516498 76 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 RNU6-453P-201ENST00000516819 85 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 AC008608.1-201ENST00000603910 127 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 MIR376A2-201ENST00000636782 80 ntBASIC0.3□□□□□ -2.36
RNF139Q8WU17 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
RNF139Q8WU17 MIR30D-201ENST00000362283 70 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.36-201ENST00000362602 112 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.82-201ENST00000363000 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.92-201ENST00000363043 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.235-201ENST00000364412 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.306-201ENST00000365015 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.312-201ENST00000365089 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.322-201ENST00000365151 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 RNU6-1189P-201ENST00000383958 107 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 SNORA1-201ENST00000384107 130 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 MIR125B2-201ENST00000385128 89 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 SNORA26.6-201ENST00000391256 115 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 MIR548I3-201ENST00000408378 149 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.604-201ENST00000410574 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 RNU2-70P-201ENST00000410718 179 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 AC113618.1-201ENST00000416747 285 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.650-201ENST00000459002 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 RNU7-185P-201ENST00000459215 60 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.777-201ENST00000516982 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.771-201ENST00000598668 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 Y_RNA.789-201ENST00000622480 102 ntBASIC0.29□□□□□ -2.36
RNF139Q8WU17 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
RNF139Q8WU17 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 Y_RNA.23-201ENST00000362496 106 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
RNF139Q8WU17 Y_RNA.432-201ENST00000384087 111 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 MIR616-201ENST00000385293 97 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 SNORA26-201ENST00000391286 122 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 AL606845.1-201ENST00000404881 255 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 SNORD100-201ENST00000408573 76 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 Y_RNA.622-201ENST00000411091 108 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 TRBVB-201ENST00000477100 408 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 AC090897.1-201ENST00000580909 226 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.28□□□□□ -2.36
RNF139Q8WU17 MIR4282-201ENST00000583613 67 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 AL162730.1-201ENST00000605734 292 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 U2.14-201ENST00000615943 113 ntBASIC0.28□□□□□ -2.36
RNF139Q8WU17 Y_RNA.7-201ENST00000362352 102 ntBASIC0.27□□□□□ -2.37
RNF139Q8WU17 Y_RNA.304-201ENST00000365011 112 ntBASIC0.27□□□□□ -2.37
RNF139Q8WU17 RNU6-639P-201ENST00000384074 107 ntBASIC0.27□□□□□ -2.37
RNF139Q8WU17 Y_RNA.512-201ENST00000384518 102 ntBASIC0.27□□□□□ -2.37
RNF139Q8WU17 RNU6-1228P-201ENST00000391014 107 ntBASIC0.27□□□□□ -2.37
RNF139Q8WU17 RNU7-102P-201ENST00000458948 62 ntBASIC0.27□□□□□ -2.37
RNF139Q8WU17 SNORD92-201ENST00000585078 85 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 276.4 ms