Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MIR4791-201ENST00000607666 84 ntBASIC1.98□□□□□ -2.09
SH3RF2Q8TEC5 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
SH3RF2Q8TEC5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
SH3RF2Q8TEC5 SNORA51.10-201ENST00000384418 136 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 RNU6-1319P-201ENST00000390855 104 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 RNU6-747P-201ENST00000390928 104 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 SNORD28B-201ENST00000390993 75 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 RNU6-241P-201ENST00000391148 104 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 RNU6-177P-201ENST00000411257 104 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 snoU13.16-201ENST00000459350 104 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 RNU6-412P-201ENST00000516434 106 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 RNU6-589P-201ENST00000516485 107 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 MIR4764-201ENST00000580680 88 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 AC095038.3-201ENST00000634439 195 ntBASIC1.97□□□□□ -2.09
SH3RF2Q8TEC5 RNY4P6-201ENST00000363667 96 ntBASIC1.96□□□□□ -2.1
SH3RF2Q8TEC5 RNU6-44P-201ENST00000384045 107 ntBASIC1.96□□□□□ -2.1
SH3RF2Q8TEC5 MIR520C-201ENST00000385005 87 ntBASIC1.96□□□□□ -2.1
SH3RF2Q8TEC5 MIR548A1-201ENST00000385041 97 ntBASIC1.96□□□□□ -2.1
SH3RF2Q8TEC5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.96□□□□□ -2.1
SH3RF2Q8TEC5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SH3RF2Q8TEC5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SH3RF2Q8TEC5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 RNU1-17P-201ENST00000363022 152 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 RNU4-16P-201ENST00000364737 141 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 RNU6-439P-201ENST00000384188 106 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 RNA5SP144-201ENST00000410846 116 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 RNU7-123P-201ENST00000515911 60 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 AL513534.2-201ENST00000603836 250 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 AL357312.1-201ENST00000603879 298 ntBASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SH3RF2Q8TEC5 RNY4P18-201ENST00000391107 89 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 RNA5SP458-201ENST00000516188 119 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 AC007012.1-201ENST00000567192 175 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 SNORA77B-201ENST00000578179 125 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 AC008133.2-201ENST00000624540 351 ntBASIC1.94□□□□□ -2.1
SH3RF2Q8TEC5 AL596028.1-201ENST00000326971 197 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 Y_RNA.35-201ENST00000362601 101 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 Y_RNA.430-201ENST00000384081 110 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 AC015688.6-201ENST00000577737 104 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 MIR4679-2-201ENST00000578358 77 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 MIR3163-201ENST00000581592 73 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 HSPE1P19-201ENST00000603327 295 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 WWP1P1-201ENST00000466609 2769 ntBASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.93□□□□□ -2.1
SH3RF2Q8TEC5 Y_RNA.299-201ENST00000364973 94 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 MIR9-3-201ENST00000385084 90 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 AC063976.4-201ENST00000421971 163 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 SNORA31.4-201ENST00000516049 129 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 RNU2-35P-201ENST00000516446 142 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 AL020996.3-201ENST00000606617 222 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
SH3RF2Q8TEC5 SNORD33-201ENST00000362761 85 ntBASIC1.91□□□□□ -2.1
SH3RF2Q8TEC5 SNORA22-201ENST00000383907 134 ntBASIC1.91□□□□□ -2.1
SH3RF2Q8TEC5 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
SH3RF2Q8TEC5 MIR30A-201ENST00000385092 71 ntBASIC1.91□□□□□ -2.1
SH3RF2Q8TEC5 snoU13.9-201ENST00000458927 103 ntBASIC1.91□□□□□ -2.1
SH3RF2Q8TEC5 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
SH3RF2Q8TEC5 PDCD5P2-201ENST00000507570 312 ntBASIC1.91□□□□□ -2.1
SH3RF2Q8TEC5 MIR6717-201ENST00000622747 73 ntBASIC1.91□□□□□ -2.1
SH3RF2Q8TEC5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SH3RF2Q8TEC5 SNORA22.1-201ENST00000362701 134 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 RNU6-755P-201ENST00000364400 103 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 Y_RNA.281-201ENST00000364774 94 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 Y_RNA.354-201ENST00000365448 111 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 Y_RNA.531-201ENST00000384589 121 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 RPS3AP1-201ENST00000413190 320 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 POLR2J4-204ENST00000418424 324 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 AC004812.1-201ENST00000540773 146 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
SH3RF2Q8TEC5 AL589743.1-201ENST00000551932 2712 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 RNA5SP48-201ENST00000363969 126 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 SNORA1.1-201ENST00000364671 133 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 RNU6-913P-201ENST00000390913 95 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 SNORA26.6-201ENST00000391256 115 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 RNU7-113P-201ENST00000459273 62 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 RNU7-45P-201ENST00000459460 63 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 SNORD111.1-201ENST00000516421 86 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms