Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 SNORD45.3-201ENST00000363836 72 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR548O-201ENST00000408583 114 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-101P-201ENST00000410323 104 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-998P-201ENST00000515894 101 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU7-161P-201ENST00000517289 62 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR378D2-201ENST00000580636 98 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR4306-201ENST00000583390 91 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC063944.3-201ENST00000609969 533 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC091304.10-201ENST00000641554 121 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-480P-201ENST00000384332 107 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU4-30P-201ENST00000410245 143 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU2-55P-201ENST00000411146 174 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AL353193.1-201ENST00000421444 268 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 SEPT14P3-201ENST00000439401 183 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AL732372.2-207ENST00000445840 183 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 SEPT14P2-201ENST00000453405 183 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MTND5P5-201ENST00000503764 376 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC019235.1-201ENST00000503847 207 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 CCDC34P1-201ENST00000507441 517 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 SEPT14P4-201ENST00000513445 186 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 FO082796.1-201ENST00000523795 183 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR499B-201ENST00000636498 73 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 SNORD114-11-201ENST00000363738 75 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR548K-201ENST00000408406 116 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-479P-201ENST00000516348 105 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 SNORA25.16-201ENST00000516741 121 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR4662B-201ENST00000579498 81 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC005357.1-201ENST00000588399 301 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC119751.7-201ENST00000600494 245 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC099654.14-201ENST00000638599 341 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-811P-201ENST00000384069 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 SNORA1-201ENST00000384107 130 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR548I2-201ENST00000408348 149 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR548I3-201ENST00000408378 149 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU7-152P-201ENST00000458982 64 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 AC144568.1-201ENST00000520139 137 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MTND1P7-201ENST00000632801 297 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR3662-201ENST00000637030 95 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-451P-201ENST00000362921 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-626P-201ENST00000363354 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-20P-201ENST00000384106 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNY3P4-201ENST00000384428 101 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR206-201ENST00000384872 86 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RPL30P15-201ENST00000457129 321 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 SNORD2-201ENST00000459163 69 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR4491-201ENST00000581087 68 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR1246-201ENST00000636535 73 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-144P-201ENST00000383951 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MTND1P29-201ENST00000448112 647 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MTND3P16-201ENST00000452205 344 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNA5SP66-201ENST00000517178 101 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 DEFB131E-201ENST00000532329 154 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR4436A-201ENST00000585278 85 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR6082-201ENST00000613604 109 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 AC091912.2-201ENST00000624798 167 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-268P-201ENST00000364174 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-99P-201ENST00000364721 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-949P-201ENST00000384040 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-297P-201ENST00000384636 107 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR563-201ENST00000385080 79 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 AL603914.1-201ENST00000401964 204 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 PRDX4P1-201ENST00000507189 574 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-958P-201ENST00000516995 106 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 MIR518F-201ENST00000384973 87 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 HLA-S-202ENST00000425174 53 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-273P-201ENST00000516937 96 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 AC090582.1-201ENST00000636321 199 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNA5SP403-201ENST00000363598 108 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.15□□□□□ -2.43
SYNE1Q8NF91 RNU7-45P-201ENST00000459460 63 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms