Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.88□□□□□ -2.11
HIPK4Q8NE63 MIR6841-201ENST00000637129 72 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
HIPK4Q8NE63 Z98742.3-201ENST00000418637 326 ntBASIC1.87□□□□□ -2.11
HIPK4Q8NE63 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HIPK4Q8NE63 RNU7-41P-201ENST00000515917 61 ntBASIC1.87□□□□□ -2.11
HIPK4Q8NE63 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
HIPK4Q8NE63 AL513534.2-201ENST00000603836 250 ntBASIC1.87□□□□□ -2.11
HIPK4Q8NE63 AC063976.4-201ENST00000421971 163 ntBASIC1.86□□□□□ -2.11
HIPK4Q8NE63 snoU13.16-201ENST00000459350 104 ntBASIC1.86□□□□□ -2.11
HIPK4Q8NE63 SNORD111.1-201ENST00000516421 86 ntBASIC1.86□□□□□ -2.11
HIPK4Q8NE63 RNU6-1258P-201ENST00000516911 111 ntBASIC1.86□□□□□ -2.11
HIPK4Q8NE63 DNAJC19P9-201ENST00000555084 351 ntBASIC1.86□□□□□ -2.11
HIPK4Q8NE63 MIR1273D-201ENST00000577266 86 ntBASIC1.86□□□□□ -2.11
HIPK4Q8NE63 MIR6717-201ENST00000622747 73 ntBASIC1.86□□□□□ -2.11
HIPK4Q8NE63 SNORA67.3-201ENST00000384366 140 ntBASIC1.85□□□□□ -2.11
HIPK4Q8NE63 RNU6-880P-201ENST00000384526 107 ntBASIC1.85□□□□□ -2.11
HIPK4Q8NE63 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.85□□□□□ -2.11
HIPK4Q8NE63 AL512326.2-201ENST00000426359 151 ntBASIC1.85□□□□□ -2.11
HIPK4Q8NE63 HMGN1P33-201ENST00000432945 451 ntBASIC1.85□□□□□ -2.11
HIPK4Q8NE63 RPL23AP94-201ENST00000512518 302 ntBASIC1.85□□□□□ -2.11
HIPK4Q8NE63 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
HIPK4Q8NE63 MIR8055-201ENST00000610739 97 ntBASIC1.85□□□□□ -2.11
HIPK4Q8NE63 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HIPK4Q8NE63 Y_RNA.213-201ENST00000364178 111 ntBASIC1.84□□□□□ -2.11
HIPK4Q8NE63 Y_RNA.430-201ENST00000384081 110 ntBASIC1.84□□□□□ -2.11
HIPK4Q8NE63 MIR30A-201ENST00000385092 71 ntBASIC1.84□□□□□ -2.11
HIPK4Q8NE63 AL022718.1-201ENST00000412004 84 ntBASIC1.84□□□□□ -2.11
HIPK4Q8NE63 AC004812.1-201ENST00000540773 146 ntBASIC1.84□□□□□ -2.11
HIPK4Q8NE63 AC007012.1-201ENST00000567192 175 ntBASIC1.84□□□□□ -2.11
HIPK4Q8NE63 MIR8063-201ENST00000621930 81 ntBASIC1.84□□□□□ -2.11
HIPK4Q8NE63 SNORA22.1-201ENST00000362701 134 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 U8.2-201ENST00000363156 134 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 Y_RNA.171-201ENST00000363760 102 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 SNORA3.2-201ENST00000408221 125 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
HIPK4Q8NE63 MIR3152-201ENST00000579801 74 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 MIR548AO-201ENST00000579992 96 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 MIR3192-201ENST00000584920 77 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 AL096861.1-201ENST00000610899 123 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 MIR4251-201ENST00000635819 61 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 MIR219B-201ENST00000637023 88 ntBASIC1.83□□□□□ -2.12
HIPK4Q8NE63 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HIPK4Q8NE63 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HIPK4Q8NE63 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HIPK4Q8NE63 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
HIPK4Q8NE63 SNORA63.4-201ENST00000362763 126 ntBASIC1.82□□□□□ -2.12
HIPK4Q8NE63 SNORD1A-201ENST00000364968 72 ntBASIC1.82□□□□□ -2.12
HIPK4Q8NE63 Y_RNA.531-201ENST00000384589 121 ntBASIC1.82□□□□□ -2.12
HIPK4Q8NE63 Y_RNA.549-201ENST00000384657 102 ntBASIC1.82□□□□□ -2.12
HIPK4Q8NE63 RNA5SP261-201ENST00000410536 106 ntBASIC1.82□□□□□ -2.12
HIPK4Q8NE63 RN7SKP223-201ENST00000410582 62 ntBASIC1.82□□□□□ -2.12
HIPK4Q8NE63 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HIPK4Q8NE63 AL035470.1-201ENST00000622571 220 ntBASIC1.82□□□□□ -2.12
HIPK4Q8NE63 Z97988.1-201ENST00000637697 135 ntBASIC1.82□□□□□ -2.12
HIPK4Q8NE63 Y_RNA.281-201ENST00000364774 94 ntBASIC1.81□□□□□ -2.12
HIPK4Q8NE63 SNORA64-201ENST00000384674 134 ntBASIC1.81□□□□□ -2.12
HIPK4Q8NE63 HSPE1P24-201ENST00000450782 238 ntBASIC1.81□□□□□ -2.12
HIPK4Q8NE63 RPS23P4-201ENST00000487908 423 ntBASIC1.81□□□□□ -2.12
HIPK4Q8NE63 AL357312.1-201ENST00000603879 298 ntBASIC1.81□□□□□ -2.12
HIPK4Q8NE63 GHRLOS.1-201ENST00000610995 70 ntBASIC1.81□□□□□ -2.12
HIPK4Q8NE63 RNY4P6-201ENST00000363667 96 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 RNU6-755P-201ENST00000364400 103 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 Y_RNA.470-201ENST00000384307 117 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 AC009474.2-201ENST00000451383 136 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.8□□□□□ -2.12
HIPK4Q8NE63 RNU6-893P-201ENST00000458841 100 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 snoU13.25-201ENST00000458945 104 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 SNORA44.1-201ENST00000517031 108 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 MIR4679-2-201ENST00000578358 77 ntBASIC1.8□□□□□ -2.12
HIPK4Q8NE63 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
HIPK4Q8NE63 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HIPK4Q8NE63 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 SNORD115-2-201ENST00000362842 82 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 SNORA1.1-201ENST00000364671 133 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 SNORD115-20-201ENST00000365099 82 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 SNORA22-201ENST00000383907 134 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 MIR759-201ENST00000390224 91 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 RPS3AP1-201ENST00000413190 320 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 AC090844.1-201ENST00000422019 156 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 RNU7-113P-201ENST00000459273 62 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 AC113410.1-201ENST00000505029 247 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 PDCD5P2-201ENST00000507570 312 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 AC019176.1-201ENST00000518519 225 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 MIR3163-201ENST00000581592 73 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.79□□□□□ -2.12
HIPK4Q8NE63 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HIPK4Q8NE63 RNA5SP48-201ENST00000363969 126 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 RNU6-153P-201ENST00000364422 104 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 Y_RNA.362-201ENST00000365518 110 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 SNORA70B-201ENST00000384210 135 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms