Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 RNU6-1299P-201ENST00000516316 100 ntBASIC0.84□□□□□ -2.27
NME8Q8N427 RNU6-365P-201ENST00000517113 106 ntBASIC0.84□□□□□ -2.27
NME8Q8N427 AC036111.3-201ENST00000526389 112 ntBASIC0.84□□□□□ -2.27
NME8Q8N427 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.84□□□□□ -2.27
NME8Q8N427 AC062037.2-201ENST00000610137 73 ntBASIC0.84□□□□□ -2.27
NME8Q8N427 uc_338.6-201ENST00000613544 171 ntBASIC0.84□□□□□ -2.27
NME8Q8N427 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
NME8Q8N427 PVT1_3.1-201ENST00000620853 95 ntBASIC0.84□□□□□ -2.27
NME8Q8N427 RNY4P28-201ENST00000365281 93 ntBASIC0.83□□□□□ -2.28
NME8Q8N427 RNU6-196P-201ENST00000384315 107 ntBASIC0.83□□□□□ -2.28
NME8Q8N427 RNU2-13P-201ENST00000515909 113 ntBASIC0.83□□□□□ -2.28
NME8Q8N427 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.83□□□□□ -2.28
NME8Q8N427 AC133485.1-201ENST00000567176 124 ntBASIC0.83□□□□□ -2.28
NME8Q8N427 AC138907.6-201ENST00000568401 126 ntBASIC0.83□□□□□ -2.28
NME8Q8N427 MIR3129-201ENST00000581095 76 ntBASIC0.83□□□□□ -2.28
NME8Q8N427 U6.104-201ENST00000637979 90 ntBASIC0.83□□□□□ -2.28
NME8Q8N427 Y_RNA.7-201ENST00000362352 102 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 Y_RNA.262-201ENST00000364641 102 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 Y_RNA.350-201ENST00000365409 98 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 SNORA2B-201ENST00000384583 137 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 MIR616-201ENST00000385293 97 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 Y_RNA.626-201ENST00000411288 95 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 AC022559.1-201ENST00000520905 205 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 AP003484.1-201ENST00000530974 250 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 U4.1-201ENST00000620349 87 ntBASIC0.82□□□□□ -2.28
NME8Q8N427 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.82□□□□□ -2.28
NME8Q8N427 RNU4-17P-201ENST00000365598 141 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 RNU6-47P-201ENST00000383866 107 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 Y_RNA.432-201ENST00000384087 111 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 Y_RNA.466-201ENST00000384294 113 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 SNORD77.3-201ENST00000391113 65 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 AC244023.1-201ENST00000426884 112 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 AL035398.1-201ENST00000430869 322 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.81□□□□□ -2.28
NME8Q8N427 RNA5SP436-201ENST00000516020 115 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 MIR3149-201ENST00000584629 83 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 MIR4719-201ENST00000585233 84 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 AC242498.1-201ENST00000604134 111 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 7SK.10-201ENST00000621414 298 ntBASIC0.81□□□□□ -2.28
NME8Q8N427 RNU6-888P-201ENST00000363010 101 ntBASIC0.8□□□□□ -2.28
NME8Q8N427 SNORD113.3-201ENST00000364630 78 ntBASIC0.8□□□□□ -2.28
NME8Q8N427 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
NME8Q8N427 Y_RNA.537-201ENST00000384626 109 ntBASIC0.8□□□□□ -2.28
NME8Q8N427 MIR1302-3-201ENST00000408128 138 ntBASIC0.8□□□□□ -2.28
NME8Q8N427 RNU6-847P-201ENST00000411115 108 ntBASIC0.8□□□□□ -2.28
NME8Q8N427 AL121914.1-201ENST00000450188 156 ntBASIC0.8□□□□□ -2.28
NME8Q8N427 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.8□□□□□ -2.28
NME8Q8N427 AC134878.1-201ENST00000619901 243 ntBASIC0.8□□□□□ -2.28
NME8Q8N427 RNU6-597P-201ENST00000365620 102 ntBASIC0.79□□□□□ -2.28
NME8Q8N427 SNORA27-201ENST00000384323 126 ntBASIC0.79□□□□□ -2.28
NME8Q8N427 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
NME8Q8N427 MIR548H3-201ENST00000408771 118 ntBASIC0.79□□□□□ -2.28
NME8Q8N427 SNORD83.1-201ENST00000411362 77 ntBASIC0.79□□□□□ -2.28
NME8Q8N427 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.79□□□□□ -2.28
NME8Q8N427 RNU6-504P-201ENST00000516568 104 ntBASIC0.79□□□□□ -2.28
NME8Q8N427 AC018659.1-201ENST00000551083 169 ntBASIC0.79□□□□□ -2.28
NME8Q8N427 AL590095.2-201ENST00000604136 117 ntBASIC0.79□□□□□ -2.28
NME8Q8N427 Y_RNA.144-201ENST00000363521 113 ntBASIC0.78□□□□□ -2.28
NME8Q8N427 RNU6-702P-201ENST00000364982 107 ntBASIC0.78□□□□□ -2.28
NME8Q8N427 SEPT7P4-201ENST00000437076 306 ntBASIC0.78□□□□□ -2.28
NME8Q8N427 MIR2115-201ENST00000516657 100 ntBASIC0.78□□□□□ -2.28
NME8Q8N427 AP000942.4-201ENST00000604811 241 ntBASIC0.78□□□□□ -2.28
NME8Q8N427 AL162730.1-201ENST00000605734 292 ntBASIC0.78□□□□□ -2.28
NME8Q8N427 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
NME8Q8N427 Y_RNA.20-201ENST00000362479 113 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 Y_RNA.182-201ENST00000363880 111 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 SNORA20.1-201ENST00000364790 130 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 SNORA1.2-201ENST00000365189 134 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 RNU6-463P-201ENST00000384340 107 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 SNORD12C-201ENST00000386307 89 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 RNU6-578P-201ENST00000390980 103 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 RNU2-11P-201ENST00000459191 187 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 MIR4662B-201ENST00000579498 81 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 MIR4744-201ENST00000581563 82 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 U6.106-201ENST00000636360 105 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 MTND5P32-201ENST00000560711 1802 ntBASIC0.77□□□□□ -2.29
NME8Q8N427 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
NME8Q8N427 MIR1-1-201ENST00000362147 71 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-34-201ENST00000362441 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-12-201ENST00000362583 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-29-201ENST00000362834 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-9-201ENST00000362912 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-21-201ENST00000362963 81 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-14-201ENST00000363090 81 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-13-201ENST00000363358 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD114-26-201ENST00000363543 72 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-41-201ENST00000363608 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-11-201ENST00000363616 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-5-201ENST00000363633 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-39-201ENST00000363694 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-4-201ENST00000363810 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-16-201ENST00000363887 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-6-201ENST00000363942 82 ntBASIC0.76□□□□□ -2.29
NME8Q8N427 SNORD115-42-201ENST00000364273 82 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms