Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR563-201ENST00000385080 79 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 MIR526A2-201ENST00000390198 65 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 SNORA53-201ENST00000391141 249 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 SNORD71-201ENST00000411292 86 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 AL138752.1-201ENST00000452964 351 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 SNORA40.15-201ENST00000516884 107 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 RNA5SP94-201ENST00000516917 108 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 RNU6-365P-201ENST00000517113 106 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.721-201ENST00000517207 102 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 RNU7-156P-201ENST00000517214 74 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 AC006006.1-201ENST00000603082 144 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.802-201ENST00000614892 130 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 RNU6-888P-201ENST00000363010 101 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.217-201ENST00000364214 105 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 MIR518A1-201ENST00000385068 85 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 SNORD12C-201ENST00000386307 89 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 MIR548I3-201ENST00000408378 149 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 SNORA40.8-201ENST00000411034 126 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.641-201ENST00000459414 105 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 RNU6-126P-201ENST00000516685 103 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 SNORD92-201ENST00000585078 85 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 AL008718.3-201ENST00000610217 321 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 snoU18.1-201ENST00000629629 71 ntBASIC0.18□□□□□ -2.38
CDKL3Q8IVW4 MIR30D-201ENST00000362283 70 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.7-201ENST00000362352 102 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 SNORA36.1-201ENST00000363424 132 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.431-201ENST00000384086 102 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.572-201ENST00000384757 98 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 MIR215-201ENST00000384858 110 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 SNORD77.3-201ENST00000391113 65 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 RNU2-11P-201ENST00000459191 187 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 RNU7-96P-201ENST00000459535 64 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.631-201ENST00000459607 101 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 RNU6-504P-201ENST00000516568 104 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 SNORA27.4-201ENST00000516650 95 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 AC022523.2-201ENST00000561045 150 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 MIR6718-201ENST00000616153 80 ntBASIC0.17□□□□□ -2.38
CDKL3Q8IVW4 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.24-201ENST00000362508 103 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.28-201ENST00000362554 111 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 RNU6-770P-201ENST00000363929 105 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 RNA5SP117-201ENST00000365294 118 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 RNU6-597P-201ENST00000365620 102 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.380-201ENST00000365663 111 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 MT-TF-201ENST00000387314 71 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 ELOCP20-201ENST00000422460 345 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 AF228730.3-201ENST00000436691 102 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 RNU6-998P-201ENST00000515894 101 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 RNY3P15-201ENST00000516297 97 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 AP003733.2-201ENST00000529409 171 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 MIR5688-201ENST00000580619 83 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 uc_338.16-201ENST00000621804 95 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 MIR376A2-201ENST00000636782 80 ntBASIC0.16□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.26-201ENST00000362539 101 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.66-201ENST00000362862 102 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.214-201ENST00000364201 112 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.229-201ENST00000364347 113 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 SNORA8.3-201ENST00000384679 139 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 RPL21P38-201ENST00000418090 167 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 AL731563.1-201ENST00000442202 214 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 RNU6-448P-201ENST00000517052 107 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 MIR3678-201ENST00000578455 94 ntBASIC0.15□□□□□ -2.39
CDKL3Q8IVW4 MIR342-201ENST00000362212 99 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.16-201ENST00000362421 102 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.19-201ENST00000362462 99 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 RNA5SP62-201ENST00000363457 110 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 RNU6-806P-201ENST00000365147 105 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.440-201ENST00000384120 114 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 SNORA8.2-201ENST00000384372 139 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 SNORA26.6-201ENST00000391256 115 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 SNORA26-201ENST00000391286 122 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 AC022028.1-201ENST00000412054 408 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 AC131281.1-201ENST00000522984 164 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 AP003327.1-201ENST00000529684 127 ntBASIC0.14□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 RNU6-740P-201ENST00000364734 105 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.410-201ENST00000383992 113 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 RNU6-211P-201ENST00000384047 107 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 RNU6-474P-201ENST00000384243 107 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 AC096949.1-201ENST00000412047 152 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 RNU6-988P-201ENST00000519081 107 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 AC133485.4-201ENST00000561835 220 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms