Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNU6-633P-201ENST00000362612 103 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 SNORA22.1-201ENST00000362701 134 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 Y_RNA.94-201ENST00000363068 106 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 RNU6-112P-201ENST00000363599 104 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 RNU6-296P-201ENST00000384608 107 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 SNORA67.4-201ENST00000384688 142 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 RNA5SP261-201ENST00000410536 106 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 AC090844.1-201ENST00000422019 156 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 RPS29P29-201ENST00000456396 171 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 RNU7-67P-201ENST00000459003 62 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 Y_RNA.676-201ENST00000516393 96 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 RNU6-958P-201ENST00000516995 106 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.99□□□□□ -1.93
RNF135Q8IUD6 MIR3152-201ENST00000579801 74 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 AC103810.7-201ENST00000607821 91 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 MIR6817-201ENST00000615588 66 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 MIR6841-201ENST00000637129 72 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF135Q8IUD6 MIR660-201ENST00000385235 97 ntBASIC2.98□□□□□ -1.93
RNF135Q8IUD6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.98□□□□□ -1.93
RNF135Q8IUD6 RNA5SP492-201ENST00000411330 114 ntBASIC2.98□□□□□ -1.93
RNF135Q8IUD6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF135Q8IUD6 snoU13.23-201ENST00000458863 104 ntBASIC2.98□□□□□ -1.93
RNF135Q8IUD6 snoU13.27-201ENST00000459278 104 ntBASIC2.98□□□□□ -1.93
RNF135Q8IUD6 RNU6-1006P-201ENST00000516998 103 ntBASIC2.98□□□□□ -1.93
RNF135Q8IUD6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.98□□□□□ -1.93
RNF135Q8IUD6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF135Q8IUD6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF135Q8IUD6 Y_RNA.247-201ENST00000364500 92 ntBASIC2.97□□□□□ -1.93
RNF135Q8IUD6 SNORA9.2-201ENST00000365361 133 ntBASIC2.97□□□□□ -1.93
RNF135Q8IUD6 SNORA24-201ENST00000384096 131 ntBASIC2.97□□□□□ -1.93
RNF135Q8IUD6 SNORA3.2-201ENST00000408221 125 ntBASIC2.97□□□□□ -1.93
RNF135Q8IUD6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF135Q8IUD6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF135Q8IUD6 ZNF658B-202ENST00000615961 3375 ntBASIC2.97□□□□□ -1.93
RNF135Q8IUD6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF135Q8IUD6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF135Q8IUD6 MIR9-1-201ENST00000385198 89 ntBASIC2.96□□□□□ -1.94
RNF135Q8IUD6 Y_RNA.609-201ENST00000410669 89 ntBASIC2.96□□□□□ -1.94
RNF135Q8IUD6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.96□□□□□ -1.94
RNF135Q8IUD6 SNORD123-201ENST00000459473 70 ntBASIC2.96□□□□□ -1.94
RNF135Q8IUD6 AP004217.1-201ENST00000480579 346 ntBASIC2.96□□□□□ -1.94
RNF135Q8IUD6 AC099513.1-201ENST00000490423 301 ntBASIC2.96□□□□□ -1.94
RNF135Q8IUD6 RNA5SP148-201ENST00000516527 94 ntBASIC2.96□□□□□ -1.94
RNF135Q8IUD6 RNU6-86P-201ENST00000606534 107 ntBASIC2.96□□□□□ -1.94
RNF135Q8IUD6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RNF135Q8IUD6 SNORA32-201ENST00000384072 121 ntBASIC2.95□□□□□ -1.94
RNF135Q8IUD6 MIR526A1-201ENST00000384897 85 ntBASIC2.95□□□□□ -1.94
RNF135Q8IUD6 SNORD28B-201ENST00000390993 75 ntBASIC2.95□□□□□ -1.94
RNF135Q8IUD6 RPS12P2-201ENST00000439728 269 ntBASIC2.95□□□□□ -1.94
RNF135Q8IUD6 UBL5P1-201ENST00000507979 193 ntBASIC2.95□□□□□ -1.94
RNF135Q8IUD6 DNAJC19P9-201ENST00000555084 351 ntBASIC2.95□□□□□ -1.94
RNF135Q8IUD6 MIR548AR-201ENST00000582191 57 ntBASIC2.95□□□□□ -1.94
RNF135Q8IUD6 SNORD3E-202ENST00000627253 216 ntBASIC2.95□□□□□ -1.94
RNF135Q8IUD6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF135Q8IUD6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF135Q8IUD6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.94□□□□□ -1.94
RNF135Q8IUD6 Y_RNA.140-201ENST00000363474 103 ntBASIC2.94□□□□□ -1.94
RNF135Q8IUD6 RNU1-112P-201ENST00000364401 164 ntBASIC2.94□□□□□ -1.94
RNF135Q8IUD6 RNU6-1163P-201ENST00000364516 107 ntBASIC2.94□□□□□ -1.94
RNF135Q8IUD6 SNORA26.6-201ENST00000391256 115 ntBASIC2.94□□□□□ -1.94
RNF135Q8IUD6 AC015712.3-201ENST00000559380 164 ntBASIC2.94□□□□□ -1.94
RNF135Q8IUD6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
RNF135Q8IUD6 AC243994.1-201ENST00000618627 109 ntBASIC2.94□□□□□ -1.94
RNF135Q8IUD6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF135Q8IUD6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF135Q8IUD6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RNF135Q8IUD6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RNF135Q8IUD6 RNU1-51P-201ENST00000365345 176 ntBASIC2.93□□□□□ -1.94
RNF135Q8IUD6 AL138827.1-201ENST00000402666 306 ntBASIC2.93□□□□□ -1.94
RNF135Q8IUD6 AL603825.1-201ENST00000438481 80 ntBASIC2.93□□□□□ -1.94
RNF135Q8IUD6 RNU7-73P-201ENST00000458743 63 ntBASIC2.93□□□□□ -1.94
RNF135Q8IUD6 MIR4712-201ENST00000583750 82 ntBASIC2.93□□□□□ -1.94
RNF135Q8IUD6 MIR4791-201ENST00000607666 84 ntBASIC2.93□□□□□ -1.94
RNF135Q8IUD6 SEPT14P17-201ENST00000617978 177 ntBASIC2.93□□□□□ -1.94
RNF135Q8IUD6 U1.36-201ENST00000620684 176 ntBASIC2.93□□□□□ -1.94
RNF135Q8IUD6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF135Q8IUD6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RNF135Q8IUD6 DEFB122-202ENST00000569013 197 ntBASIC2.92□□□□□ -1.94
RNF135Q8IUD6 MIR6717-201ENST00000622747 73 ntBASIC2.92□□□□□ -1.94
RNF135Q8IUD6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RNF135Q8IUD6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
RNF135Q8IUD6 MIR424-201ENST00000362227 98 ntBASIC2.91□□□□□ -1.94
RNF135Q8IUD6 SNORA3A-201ENST00000364113 130 ntBASIC2.91□□□□□ -1.94
RNF135Q8IUD6 SNORD115-27-201ENST00000364430 82 ntBASIC2.91□□□□□ -1.94
RNF135Q8IUD6 RNU6-1190P-201ENST00000410811 104 ntBASIC2.91□□□□□ -1.94
RNF135Q8IUD6 AL020996.3-201ENST00000606617 222 ntBASIC2.91□□□□□ -1.94
RNF135Q8IUD6 SNORD38.1-201ENST00000363863 68 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 Y_RNA.565-201ENST00000384719 101 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 RNU6-1067P-201ENST00000384752 107 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 RNU6-913P-201ENST00000390913 95 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 RNA5SP21-201ENST00000410917 96 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 RNA5SP247-201ENST00000411181 105 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 AL445685.2-201ENST00000422551 342 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 AC108210.2-201ENST00000503681 201 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 RNU7-2P-201ENST00000516096 62 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 MIR4529-201ENST00000578110 78 ntBASIC2.9□□□□□ -1.95
RNF135Q8IUD6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF135Q8IUD6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RNF135Q8IUD6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms