Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4DQ86TL0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
ATG4DQ86TL0 RNU6-865P-201ENST00000364772 107 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 MIR196B-201ENST00000384852 84 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 MIR181B2-201ENST00000385004 89 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.36□□□□□ -2.03
ATG4DQ86TL0 RNU7-153P-201ENST00000516455 62 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 RNU7-35P-201ENST00000517174 62 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.36□□□□□ -2.03
ATG4DQ86TL0 MIR5094-201ENST00000578766 85 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 MIR4298-201ENST00000584380 73 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 AC022202.1-201ENST00000613515 211 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 FO624990.1-201ENST00000636373 85 ntBASIC2.36□□□□□ -2.03
ATG4DQ86TL0 RNU6-859P-201ENST00000362728 107 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 RNA5SP126-201ENST00000365092 109 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 MIR452-201ENST00000385020 85 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ATG4DQ86TL0 RNU6-1321P-201ENST00000390905 107 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 SNORD123-201ENST00000459473 70 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 SNORD3E-202ENST00000627253 216 ntBASIC2.35□□□□□ -2.03
ATG4DQ86TL0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.35□□□□□ -2.03
ATG4DQ86TL0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ATG4DQ86TL0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATG4DQ86TL0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
ATG4DQ86TL0 RNU4-82P-201ENST00000362443 140 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 SNORD115-37-201ENST00000363768 82 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 RNU6-461P-201ENST00000364195 107 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.34□□□□□ -2.03
ATG4DQ86TL0 MIR5092-201ENST00000583139 88 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 AC069114.2-201ENST00000604699 304 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 U7.4-201ENST00000614961 63 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 AC012676.2-201ENST00000619258 186 ntBASIC2.34□□□□□ -2.03
ATG4DQ86TL0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ATG4DQ86TL0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
ATG4DQ86TL0 Y_RNA.173-201ENST00000363776 113 ntBASIC2.33□□□□□ -2.04
ATG4DQ86TL0 MIR526A1-201ENST00000384897 85 ntBASIC2.33□□□□□ -2.04
ATG4DQ86TL0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.33□□□□□ -2.04
ATG4DQ86TL0 AC004223.1-201ENST00000479840 271 ntBASIC2.33□□□□□ -2.04
ATG4DQ86TL0 RNU7-79P-201ENST00000516082 62 ntBASIC2.33□□□□□ -2.04
ATG4DQ86TL0 MTND5P40-201ENST00000559945 246 ntBASIC2.33□□□□□ -2.04
ATG4DQ86TL0 AC005786.1-201ENST00000588553 154 ntBASIC2.33□□□□□ -2.04
ATG4DQ86TL0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATG4DQ86TL0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATG4DQ86TL0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.32□□□□□ -2.04
ATG4DQ86TL0 BX510359.4-201ENST00000423750 193 ntBASIC2.32□□□□□ -2.04
ATG4DQ86TL0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.32□□□□□ -2.04
ATG4DQ86TL0 MIR4446-201ENST00000578505 67 ntBASIC2.32□□□□□ -2.04
ATG4DQ86TL0 MIR8055-201ENST00000610739 97 ntBASIC2.32□□□□□ -2.04
ATG4DQ86TL0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.32□□□□□ -2.04
ATG4DQ86TL0 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.32□□□□□ -2.04
ATG4DQ86TL0 MIR8065-201ENST00000620577 100 ntBASIC2.32□□□□□ -2.04
ATG4DQ86TL0 Y_RNA.788-201ENST00000622394 112 ntBASIC2.32□□□□□ -2.04
ATG4DQ86TL0 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
ATG4DQ86TL0 Y_RNA.57-201ENST00000362806 113 ntBASIC2.31□□□□□ -2.04
ATG4DQ86TL0 RNU6-478P-201ENST00000363904 110 ntBASIC2.31□□□□□ -2.04
ATG4DQ86TL0 Y_RNA.545-201ENST00000384652 105 ntBASIC2.31□□□□□ -2.04
ATG4DQ86TL0 Z98742.3-201ENST00000418637 326 ntBASIC2.31□□□□□ -2.04
ATG4DQ86TL0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.31□□□□□ -2.04
ATG4DQ86TL0 FAM106DP-201ENST00000586416 501 ntBASIC2.31□□□□□ -2.04
ATG4DQ86TL0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.31□□□□□ -2.04
ATG4DQ86TL0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.31□□□□□ -2.04
ATG4DQ86TL0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
ATG4DQ86TL0 SNORA2B-201ENST00000384583 137 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ATG4DQ86TL0 RNU6-129P-201ENST00000391022 107 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 RNU6-519P-201ENST00000410590 108 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 SUMO1P4-201ENST00000429430 302 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 AL450471.1-201ENST00000447509 127 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 SNORA25.13-201ENST00000516395 103 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 RNA5SP148-201ENST00000516527 94 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 RNU7-137P-201ENST00000516788 62 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.3□□□□□ -2.04
ATG4DQ86TL0 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
ATG4DQ86TL0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATG4DQ86TL0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.29□□□□□ -2.04
ATG4DQ86TL0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.29□□□□□ -2.04
ATG4DQ86TL0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ATG4DQ86TL0 RNU4-32P-201ENST00000363404 141 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 Y_RNA.168-201ENST00000363740 102 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 RNA5SP68-201ENST00000363885 119 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 RNU6-301P-201ENST00000384277 107 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 RNU6-1237P-201ENST00000384777 107 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 MIR597-201ENST00000384968 97 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ATG4DQ86TL0 AC087499.7-201ENST00000441958 109 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 RNU7-48P-201ENST00000458875 63 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 AC234781.5-201ENST00000508429 271 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 MIR3670-2-201ENST00000582974 65 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 MIR3670-1-201ENST00000584160 65 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 MIR3670-3-201ENST00000584855 65 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 MIR3670-4-201ENST00000612260 65 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 MAPK10-266ENST00000641066 6555 ntBASIC2.29□□□□□ -2.04
ATG4DQ86TL0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATG4DQ86TL0 RNU6-315P-201ENST00000362666 107 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms