Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RNU6-998P-201ENST00000515894 101 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 RNU6-479P-201ENST00000516348 105 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 AC127455.1-201ENST00000565496 145 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 AP003357.1-201ENST00000604497 148 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 AC018714.1-201ENST00000605028 208 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 RNU6-553P-201ENST00000364047 96 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 RNU4-68P-201ENST00000364314 141 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 SNORD116.1-201ENST00000365628 92 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 RNU2-14P-201ENST00000411053 191 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 MTATP6P26-201ENST00000445926 662 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 SNORD42A-201ENST00000459584 64 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 MTND4P7-201ENST00000523876 130 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 MIR5188-201ENST00000583467 113 ntBASIC-0.89□□□□□ -2.55
CSMD3Q7Z407 RNU6-653P-201ENST00000363074 106 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 RNU4-80P-201ENST00000363200 141 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 RNU6-588P-201ENST00000410281 105 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 AC084290.1-201ENST00000434995 374 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 SNORD113-7-201ENST00000363762 77 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 SNORD18.1-201ENST00000363807 70 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 RNU6-454P-201ENST00000364292 107 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 MIR889-201ENST00000401280 79 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 AL008718.3-201ENST00000610217 321 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 MIR6818-201ENST00000621576 65 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 SNORD11-201ENST00000459124 84 ntBASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.9□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.91□□□□□ -2.55
CSMD3Q7Z407 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.91□□□□□ -2.55
CSMD3Q7Z407 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.91□□□□□ -2.55
CSMD3Q7Z407 AL603914.1-201ENST00000401964 204 ntBASIC-0.91□□□□□ -2.55
CSMD3Q7Z407 RNU6-899P-201ENST00000363947 107 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 AC098479.1-201ENST00000609225 154 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 AC069503.3-201ENST00000618674 145 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 RNU6-128P-201ENST00000383976 107 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 MIR1278-201ENST00000408753 81 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 RNU6-195P-201ENST00000411352 109 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 MTCYBP8-201ENST00000422855 651 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 RNU7-134P-201ENST00000458997 64 ntBASIC-0.91□□□□□ -2.56
CSMD3Q7Z407 RNU6-157P-201ENST00000383957 107 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU6-906P-201ENST00000384700 70 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU2-72P-201ENST00000411175 163 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 AL356010.1-201ENST00000456364 102 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 YWHAEP3-201ENST00000582767 121 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 AL133215.3-201ENST00000609801 448 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU6-181P-201ENST00000363225 107 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU4-20P-201ENST00000365601 151 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU6-625P-201ENST00000459412 107 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU6-445P-201ENST00000516949 107 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 AP000240.1-201ENST00000609910 452 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 SNORD72-201ENST00000390994 80 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 USP9YP30-201ENST00000430729 455 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU6-470P-201ENST00000515954 104 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU6-531P-201ENST00000516694 104 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 AL158063.1-201ENST00000615349 536 ntBASIC-0.92□□□□□ -2.56
CSMD3Q7Z407 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU6-601P-201ENST00000384540 107 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 MIR652-201ENST00000385278 98 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU6-911P-201ENST00000516523 104 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 MIR3139-201ENST00000579145 76 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 MIR5704-201ENST00000584029 77 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU7-79P-201ENST00000516082 62 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU6-913P-201ENST00000390913 95 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU7-180P-201ENST00000459240 63 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU7-141P-201ENST00000459304 62 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 MIR4662B-201ENST00000579498 81 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 AC124303.1-201ENST00000605703 360 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RN7SKP299-201ENST00000606679 301 ntBASIC-0.93□□□□□ -2.56
CSMD3Q7Z407 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.94□□□□□ -2.56
CSMD3Q7Z407 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.94□□□□□ -2.56
CSMD3Q7Z407 RNU6-973P-201ENST00000364690 107 ntBASIC-0.94□□□□□ -2.56
CSMD3Q7Z407 RNU7-187P-201ENST00000458985 68 ntBASIC-0.94□□□□□ -2.56
CSMD3Q7Z407 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.94□□□□□ -2.56
CSMD3Q7Z407 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms