Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC243994.1-201ENST00000618627 109 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 AL121890.5-201ENST00000620848 304 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 AC095038.3-201ENST00000634439 195 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 Y_RNA.81-201ENST00000362997 102 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 RNU1-17P-201ENST00000363022 152 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-747P-201ENST00000390928 104 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-241P-201ENST00000391148 104 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 AL451046.2-201ENST00000403074 277 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-177P-201ENST00000411257 104 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 DNAJC19P9-201ENST00000555084 351 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 MIR4305-201ENST00000583252 102 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 AL513534.2-201ENST00000603836 250 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 AC021613.1-201ENST00000623880 111 ntBASIC2.18□□□□□ -2.06
RUFY4Q6ZNE9 Y_RNA.198-201ENST00000364013 98 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 Y_RNA.298-201ENST00000364960 107 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 MIR570-201ENST00000384917 97 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 SNORD28B-201ENST00000390993 75 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 MTND5P34-201ENST00000568888 325 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 MIR4498-201ENST00000577599 66 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 AC015688.6-201ENST00000577737 104 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 MIR4791-201ENST00000607666 84 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 uc_338.20-201ENST00000621563 178 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 AC106754.2-201ENST00000623006 233 ntBASIC2.17□□□□□ -2.06
RUFY4Q6ZNE9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 RNA5SP259-201ENST00000365541 109 ntBASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-439P-201ENST00000384188 106 ntBASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 MIR759-201ENST00000390224 91 ntBASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 Y_RNA.649-201ENST00000459077 103 ntBASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 snoU13.16-201ENST00000459350 104 ntBASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-958P-201ENST00000516995 106 ntBASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 MIR4764-201ENST00000580680 88 ntBASIC2.16□□□□□ -2.06
RUFY4Q6ZNE9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
RUFY4Q6ZNE9 Y_RNA.213-201ENST00000364178 111 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 SNORA51.10-201ENST00000384418 136 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 MIR520C-201ENST00000385005 87 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 RNU2-40P-201ENST00000410833 196 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 AL035461.1-201ENST00000421490 332 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 AL445685.2-201ENST00000422551 342 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 RNU7-164P-201ENST00000459221 62 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 RN7SL274P-201ENST00000492268 272 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 RNY4P20-201ENST00000516678 93 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 AL357312.1-201ENST00000603879 298 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 AC103810.8-201ENST00000607347 118 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RUFY4Q6ZNE9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
RUFY4Q6ZNE9 Y_RNA.430-201ENST00000384081 110 ntBASIC2.14□□□□□ -2.07
RUFY4Q6ZNE9 SNORD116-21-201ENST00000384507 92 ntBASIC2.14□□□□□ -2.07
RUFY4Q6ZNE9 RNU6-880P-201ENST00000384526 107 ntBASIC2.14□□□□□ -2.07
RUFY4Q6ZNE9 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
RUFY4Q6ZNE9 AC008133.2-201ENST00000624540 351 ntBASIC2.14□□□□□ -2.07
RUFY4Q6ZNE9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 RNU6-429P-201ENST00000384582 108 ntBASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 RNA5SP144-201ENST00000410846 116 ntBASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 AL022718.1-201ENST00000412004 84 ntBASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 SNORA31.4-201ENST00000516049 129 ntBASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 RNU6-589P-201ENST00000516485 107 ntBASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 Y_RNA.709-201ENST00000516952 92 ntBASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 MIR6129-201ENST00000616087 109 ntBASIC2.13□□□□□ -2.07
RUFY4Q6ZNE9 MIR337-201ENST00000362281 93 ntBASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 SNORD33-201ENST00000362761 85 ntBASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 RNY4P6-201ENST00000363667 96 ntBASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 MIR30A-201ENST00000385092 71 ntBASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 RNU6-250P-201ENST00000516958 103 ntBASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.12□□□□□ -2.07
RUFY4Q6ZNE9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.11□□□□□ -2.07
RUFY4Q6ZNE9 snoU13.9-201ENST00000458927 103 ntBASIC2.11□□□□□ -2.07
RUFY4Q6ZNE9 RNU7-123P-201ENST00000515911 60 ntBASIC2.11□□□□□ -2.07
RUFY4Q6ZNE9 MIR514B-201ENST00000516774 80 ntBASIC2.11□□□□□ -2.07
RUFY4Q6ZNE9 MIR4679-2-201ENST00000578358 77 ntBASIC2.11□□□□□ -2.07
RUFY4Q6ZNE9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.11□□□□□ -2.07
RUFY4Q6ZNE9 AL020996.3-201ENST00000606617 222 ntBASIC2.11□□□□□ -2.07
RUFY4Q6ZNE9 WWP1P1-201ENST00000466609 2769 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 SNORA26.6-201ENST00000391256 115 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 RNU6-412P-201ENST00000516434 106 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 RNU2-35P-201ENST00000516446 142 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 MIR3198-2-201ENST00000577868 80 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 HSPE1P19-201ENST00000603327 295 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 MIR6717-201ENST00000622747 73 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
RUFY4Q6ZNE9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 Y_RNA.226-201ENST00000364337 114 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 RNU4-16P-201ENST00000364737 141 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 Y_RNA.299-201ENST00000364973 94 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms