| FOXD4L3 | Q6VB84 | SNORD115-12-201 | ENST00000362583 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORA63.2-201 | ENST00000362603 | 126 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-29-201 | ENST00000362834 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-9-201 | ENST00000362912 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-21-201 | ENST00000362963 | 81 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-14-201 | ENST00000363090 | 81 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-41-201 | ENST00000363608 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-11-201 | ENST00000363616 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-5-201 | ENST00000363633 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-39-201 | ENST00000363694 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-4-201 | ENST00000363810 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-6-201 | ENST00000363942 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-42-201 | ENST00000364273 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD114-6-201 | ENST00000364393 | 72 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-15-201 | ENST00000364809 | 81 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-26-201 | ENST00000365067 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-10-201 | ENST00000365073 | 81 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-43-201 | ENST00000365503 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORD115-36-201 | ENST00000365629 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | TRBV12-1-201 | ENST00000479785 | 344 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | RNU6-70P-201 | ENST00000516438 | 60 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | RNU6-807P-201 | ENST00000516805 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | RNA5SP137-201 | ENST00000516833 | 135 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | RNU6-90P-201 | ENST00000606352 | 106 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | MIR1297-201 | ENST00000637311 | 77 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SIRT1-203 | ENST00000406900 | 3295 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | KTN1-207 | ENST00000438792 | 4449 nt | APPRIS ALT2 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | AP006437.1-201 | ENST00000641440 | 3685 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | TBC1D31-214 | ENST00000522420 | 3167 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | CHD9-202 | ENST00000398510 | 11337 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | RNU5F-1-201 | ENST00000362507 | 117 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | SNORA22.1-201 | ENST00000362701 | 134 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.241-201 | ENST00000364470 | 117 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | RNU1-98P-201 | ENST00000458992 | 160 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 2.9 | □□□□□ -1.94 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.168-201 | ENST00000363740 | 102 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.173-201 | ENST00000363776 | 113 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORA5B-201 | ENST00000363786 | 132 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORA25B-201 | ENST00000365507 | 128 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU6-480P-201 | ENST00000384332 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU6-540P-201 | ENST00000384622 | 101 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR34C-201 | ENST00000384831 | 77 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU6-587P-201 | ENST00000391282 | 106 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC245047.3-201 | ENST00000429428 | 127 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC087499.7-201 | ENST00000441958 | 109 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | FGF7P7-201 | ENST00000514120 | 227 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR7106-201 | ENST00000612419 | 65 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | ARHGAP15-202 | ENST00000409869 | 2968 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | APC-201 | ENST00000257430 | 10701 nt | APPRIS P1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORA25.9-201 | ENST00000365087 | 128 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.510-201 | ENST00000384511 | 114 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNA5SP261-201 | ENST00000410536 | 106 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR4529-201 | ENST00000578110 | 78 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORD3E-202 | ENST00000627253 | 216 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | ARHGAP28-204 | ENST00000419673 | 5492 nt | APPRIS P2 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MAP3K2-203 | ENST00000409947 | 10992 nt | APPRIS P1 TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MACC1-202 | ENST00000400331 | 9159 nt | APPRIS P1 TSL 2 BASIC | 2.88 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU6-862P-201 | ENST00000362804 | 105 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC105272.1-201 | ENST00000438604 | 198 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORD109B-201 | ENST00000458961 | 67 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORD109A-201 | ENST00000459128 | 67 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR5092-201 | ENST00000583139 | 88 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SLC6A15-202 | ENST00000309283 | 3108 nt | TSL 5 BASIC | 2.88 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC080100.1-201 | ENST00000624239 | 5356 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR6073-201 | ENST00000352083 | 89 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU6-614P-201 | ENST00000384369 | 107 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU6-205P-201 | ENST00000390858 | 107 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU6-1190P-201 | ENST00000410811 | 104 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU7-193P-201 | ENST00000516723 | 65 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | U6.59-201 | ENST00000615686 | 107 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | EFR3A-202 | ENST00000519656 | 5247 nt | TSL 1 (best) BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | FGF7-201 | ENST00000267843 | 5467 nt | APPRIS P1 TSL 1 (best) BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | ZNF470-202 | ENST00000391709 | 6601 nt | APPRIS P1 TSL 5 BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORA32-201 | ENST00000384072 | 121 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORD38.2-201 | ENST00000384470 | 69 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.532-201 | ENST00000384590 | 113 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR206-201 | ENST00000384872 | 86 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR181B2-201 | ENST00000385004 | 89 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC244636.1-201 | ENST00000421152 | 228 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC234781.5-202 | ENST00000453508 | 426 nt | TSL 3 BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU7-34P-201 | ENST00000459394 | 64 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORA31.25-201 | ENST00000517242 | 134 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | OGN-202 | ENST00000375561 | 2743 nt | APPRIS P1 TSL 1 (best) BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | TAB2-201 | ENST00000367456 | 4553 nt | APPRIS P1 TSL 5 BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | ZNF451-208 | ENST00000491832 | 3632 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.86 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | KPNA5-202 | ENST00000368564 | 11311 nt | APPRIS P1 TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SMARCAD1-201 | ENST00000354268 | 4912 nt | APPRIS P3 TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORA80A-201 | ENST00000363922 | 136 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU1-91P-201 | ENST00000364746 | 163 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU6-663P-201 | ENST00000391105 | 106 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AL606517.2-201 | ENST00000442855 | 241 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SPINT5P-201 | ENST00000448174 | 155 nt | BASIC | 2.85 | □□□□□ -1.95 | | |