Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU6-865P-201ENST00000364772 107 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 RNA5SP138-201ENST00000365098 114 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 SNORA2B-201ENST00000384583 137 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 MIR526A1-201ENST00000384897 85 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 MIR136-201ENST00000385207 82 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 RNU6-129P-201ENST00000391022 107 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 RNA5SP181-201ENST00000410246 98 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 AC105272.1-201ENST00000438604 198 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 RN7SKP132-201ENST00000516001 208 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 RNU6-917P-201ENST00000516294 104 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 MIR5094-201ENST00000578766 85 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 MIR8055-201ENST00000610739 97 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 MIR8065-201ENST00000620577 100 ntBASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 RNU6-315P-201ENST00000362666 107 ntBASIC2.86□□□□□ -1.95
FOXR1Q6PIV2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
FOXR1Q6PIV2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.86□□□□□ -1.95
FOXR1Q6PIV2 RNU7-137P-201ENST00000516788 62 ntBASIC2.86□□□□□ -1.95
FOXR1Q6PIV2 MIR4435-1-201ENST00000582552 80 ntBASIC2.86□□□□□ -1.95
FOXR1Q6PIV2 FO624990.1-201ENST00000636373 85 ntBASIC2.86□□□□□ -1.95
FOXR1Q6PIV2 AP000648.3-201ENST00000623539 4507 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 SNORD21-201ENST00000383953 95 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 MIR196B-201ENST00000384852 84 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 MIR512-1-201ENST00000384913 84 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 AL034345.1-201ENST00000407768 123 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 RNA5SP184-201ENST00000411071 108 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 RNA5SP492-201ENST00000411330 114 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 SCARNA18B-201ENST00000458806 135 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 MIR6715A-201ENST00000615929 79 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 SNORD3E-202ENST00000627253 216 ntBASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXR1Q6PIV2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 MIR452-201ENST00000385020 85 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 SNORA11.4-201ENST00000408823 129 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 RNU6-519P-201ENST00000410590 108 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 RNA5SP508-201ENST00000411327 119 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 AC087499.2-201ENST00000432861 149 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 RPS29P12-201ENST00000460178 152 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 MTND5P40-201ENST00000559945 246 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 MIR3134-201ENST00000579433 74 ntBASIC2.84□□□□□ -1.95
FOXR1Q6PIV2 RNU4-32P-201ENST00000363404 141 ntBASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 RNU6-461P-201ENST00000364195 107 ntBASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 SNORA31.15-201ENST00000516771 132 ntBASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 AC079600.2-201ENST00000550076 130 ntBASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 MIR3162-201ENST00000581818 82 ntBASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 AC104984.5-201ENST00000586878 94 ntBASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.83□□□□□ -1.96
FOXR1Q6PIV2 MIR6073-201ENST00000352083 89 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 RNU4-82P-201ENST00000362443 140 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 RNU6-1031P-201ENST00000384773 107 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 AC108938.1-201ENST00000451204 136 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 RNU7-48P-201ENST00000458875 63 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 RNA5SP402-201ENST00000517148 110 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 AC069114.2-201ENST00000604699 304 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 AC008163.1-202ENST00000636004 2889 ntBASIC2.82□□□□□ -1.96
FOXR1Q6PIV2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 RNU6-624P-201ENST00000363411 107 ntBASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 RNU6-1237P-201ENST00000384777 107 ntBASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 RNU6-602P-201ENST00000411155 105 ntBASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 SNORA9.3-201ENST00000516383 129 ntBASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 RNU6-56P-201ENST00000516986 93 ntBASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.81□□□□□ -1.96
FOXR1Q6PIV2 AC062016.1-201ENST00000355719 319 ntBASIC2.8□□□□□ -1.96
FOXR1Q6PIV2 RNA5SP133-201ENST00000363368 119 ntBASIC2.8□□□□□ -1.96
FOXR1Q6PIV2 Y_RNA.168-201ENST00000363740 102 ntBASIC2.8□□□□□ -1.96
FOXR1Q6PIV2 RNU6-590P-201ENST00000365039 107 ntBASIC2.8□□□□□ -1.96
FOXR1Q6PIV2 MIR597-201ENST00000384968 97 ntBASIC2.8□□□□□ -1.96
FOXR1Q6PIV2 RPL23AP6-201ENST00000446637 472 ntBASIC2.8□□□□□ -1.96
FOXR1Q6PIV2 SNORD4B-201ENST00000459083 72 ntBASIC2.8□□□□□ -1.96
FOXR1Q6PIV2 AC005786.1-201ENST00000588553 154 ntBASIC2.8□□□□□ -1.96
FOXR1Q6PIV2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 RNU1-58P-201ENST00000362413 163 ntBASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 RNU6-1094P-201ENST00000362416 104 ntBASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 SNORD114-10-201ENST00000363409 72 ntBASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 MIR1236-201ENST00000408340 102 ntBASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 SNORD109B-201ENST00000458961 67 ntBASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 SNORD109A-201ENST00000459128 67 ntBASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 MIR4446-201ENST00000578505 67 ntBASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
FOXR1Q6PIV2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
FOXR1Q6PIV2 Y_RNA.98-201ENST00000363109 102 ntBASIC2.78□□□□□ -1.96
FOXR1Q6PIV2 RNU6-480P-201ENST00000384332 107 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms