Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
PRPF40BQ6NWY9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PRPF40BQ6NWY9 U8.6-201ENST00000364939 135 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 MIR526A1-201ENST00000384897 85 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 RNA5SP261-201ENST00000410536 106 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 RNA5SP100-201ENST00000410903 110 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 RNA5SP59-201ENST00000410922 110 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 RNU6-893P-201ENST00000458841 100 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 RNU7-45P-201ENST00000459460 63 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 SNORA31.17-201ENST00000516953 127 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 AC068339.1-201ENST00000526965 141 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 MIR3152-201ENST00000579801 74 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 FAM106DP-201ENST00000586416 501 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.53□□□□□ -2
PRPF40BQ6NWY9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 AL442644.1-201ENST00000454390 3105 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 SNORA67.1-201ENST00000364749 141 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 Y_RNA.328-201ENST00000365208 113 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 Y_RNA.344-201ENST00000365381 112 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 SNORD23.1-201ENST00000408212 104 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 RPL39P25-201ENST00000449384 154 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 RNA5SP182-201ENST00000516064 82 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-94P-201ENST00000607728 107 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRPF40BQ6NWY9 RNU7-113P-201ENST00000459273 62 ntBASIC2.51□□□□□ -2.01
PRPF40BQ6NWY9 AC055731.1-201ENST00000474387 401 ntBASIC2.51□□□□□ -2.01
PRPF40BQ6NWY9 AC004812.1-201ENST00000540773 146 ntBASIC2.51□□□□□ -2.01
PRPF40BQ6NWY9 MIR5009-201ENST00000578736 100 ntBASIC2.51□□□□□ -2.01
PRPF40BQ6NWY9 AC006254.2-201ENST00000603259 279 ntBASIC2.51□□□□□ -2.01
PRPF40BQ6NWY9 AC243994.1-201ENST00000618627 109 ntBASIC2.51□□□□□ -2.01
PRPF40BQ6NWY9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRPF40BQ6NWY9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.51□□□□□ -2.01
PRPF40BQ6NWY9 RNA5SP160-201ENST00000364866 120 ntBASIC2.5□□□□□ -2.01
PRPF40BQ6NWY9 SNORD28B-201ENST00000390993 75 ntBASIC2.5□□□□□ -2.01
PRPF40BQ6NWY9 AL512326.2-201ENST00000426359 151 ntBASIC2.5□□□□□ -2.01
PRPF40BQ6NWY9 MIR548AR-201ENST00000582191 57 ntBASIC2.5□□□□□ -2.01
PRPF40BQ6NWY9 snoU13.31-201ENST00000607291 104 ntBASIC2.5□□□□□ -2.01
PRPF40BQ6NWY9 MIR4791-201ENST00000607666 84 ntBASIC2.5□□□□□ -2.01
PRPF40BQ6NWY9 Y_RNA.531-201ENST00000384589 121 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-360P-201ENST00000390944 104 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 RNY4P30-201ENST00000410216 95 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 RPL23AP6-201ENST00000446637 472 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 RPS23P4-201ENST00000487908 423 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 AC141557.1-201ENST00000540982 400 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 DNAJC19P9-201ENST00000555084 351 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 AL513534.2-201ENST00000603836 250 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 MIR203B-201ENST00000636080 86 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 AL162726.3-218ENST00000636401 95 ntBASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 SNORA22.1-201ENST00000362701 134 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-457P-201ENST00000363999 107 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 Y_RNA.299-201ENST00000364973 94 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 MIR489-201ENST00000384923 84 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-747P-201ENST00000390928 104 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-241P-201ENST00000391148 104 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 MIR1912-201ENST00000410389 80 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-177P-201ENST00000411257 104 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 POLR2J4-204ENST00000418424 324 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 SNORA31.4-201ENST00000516049 129 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 AC121758.2-201ENST00000553271 193 ntBASIC2.48□□□□□ -2.01
PRPF40BQ6NWY9 Y_RNA.507-201ENST00000384500 99 ntBASIC2.47□□□□□ -2.01
PRPF40BQ6NWY9 Y_RNA.544-201ENST00000384650 113 ntBASIC2.47□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-816P-201ENST00000390914 107 ntBASIC2.47□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-1268P-201ENST00000391214 107 ntBASIC2.47□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-1239P-201ENST00000391310 107 ntBASIC2.47□□□□□ -2.01
PRPF40BQ6NWY9 RNU6-717P-201ENST00000459076 104 ntBASIC2.47□□□□□ -2.01
PRPF40BQ6NWY9 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
PRPF40BQ6NWY9 Y_RNA.171-201ENST00000363760 102 ntBASIC2.46□□□□□ -2.02
PRPF40BQ6NWY9 SNORA24-201ENST00000384096 131 ntBASIC2.46□□□□□ -2.02
PRPF40BQ6NWY9 SNORA51.10-201ENST00000384418 136 ntBASIC2.46□□□□□ -2.02
PRPF40BQ6NWY9 RNA5SP212-201ENST00000391223 107 ntBASIC2.46□□□□□ -2.02
PRPF40BQ6NWY9 AL445685.2-201ENST00000422551 342 ntBASIC2.46□□□□□ -2.02
PRPF40BQ6NWY9 AC011753.1-201ENST00000451001 220 ntBASIC2.46□□□□□ -2.02
PRPF40BQ6NWY9 RNU7-73P-201ENST00000458743 63 ntBASIC2.46□□□□□ -2.02
PRPF40BQ6NWY9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.46□□□□□ -2.02
PRPF40BQ6NWY9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRPF40BQ6NWY9 MIR378A-201ENST00000362177 66 ntBASIC2.45□□□□□ -2.02
PRPF40BQ6NWY9 SNORD77B-201ENST00000391112 67 ntBASIC2.45□□□□□ -2.02
PRPF40BQ6NWY9 AC079804.2-201ENST00000490376 200 ntBASIC2.45□□□□□ -2.02
PRPF40BQ6NWY9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.45□□□□□ -2.02
PRPF40BQ6NWY9 SNORA74.3-201ENST00000517108 154 ntBASIC2.45□□□□□ -2.02
PRPF40BQ6NWY9 MIR5582-201ENST00000579697 68 ntBASIC2.45□□□□□ -2.02
PRPF40BQ6NWY9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 RNU6-661P-201ENST00000362409 107 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 Y_RNA.537-201ENST00000384626 109 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 RNA5SP338-201ENST00000410495 85 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 RNU4-69P-201ENST00000410677 143 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 AC003989.2-201ENST00000440224 169 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 AC025033.1-201ENST00000463883 194 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 RNU2-13P-201ENST00000515909 113 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 RNU6-322P-201ENST00000516010 103 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 RNU7-43P-201ENST00000516554 64 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms