Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQA1Q5Y7H0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DQA1Q5Y7H0 RNU4-67P-201ENST00000364569 141 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 SNORA32-201ENST00000384072 121 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 RNU6-439P-201ENST00000384188 106 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 RNU6-49P-201ENST00000384256 107 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 RNU6-616P-201ENST00000384353 107 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 MIR520C-201ENST00000385005 87 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 MIR605-201ENST00000385078 83 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 snoU13.16-201ENST00000459350 104 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 RNU6-970P-201ENST00000516312 107 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 RNU7-43P-201ENST00000516554 64 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 AL590808.1-201ENST00000618696 141 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 Y_RNA.818-201ENST00000618813 71 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 AC008133.2-201ENST00000624540 351 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 FO624990.1-201ENST00000636373 85 ntBASIC2.09□□□□□ -2.07
HLA-DQA1Q5Y7H0 RNU6-1099P-201ENST00000363533 107 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR488-201ENST00000365739 83 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-409P-201ENST00000384114 104 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 SNORA7.5-201ENST00000410672 110 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 RPS3AP1-201ENST00000413190 320 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 AL356320.1-201ENST00000429616 163 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 RPL23AP94-201ENST00000512518 302 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNA5SP402-201ENST00000517148 110 ntBASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HLA-DQA1Q5Y7H0 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNY3P2-201ENST00000362918 102 ntBASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 SNORA1.1-201ENST00000364671 133 ntBASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNA5SP259-201ENST00000365541 109 ntBASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 AL023284.1-201ENST00000403956 276 ntBASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-733P-201ENST00000410759 104 ntBASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 MTATP8P2-201ENST00000435212 202 ntBASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR4446-201ENST00000578505 67 ntBASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU4-36P-201ENST00000364294 144 ntBASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 Y_RNA.360-201ENST00000365512 102 ntBASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR577-201ENST00000385196 96 ntBASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 SNORD77B-201ENST00000391112 67 ntBASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 AL353813.1-201ENST00000440700 253 ntBASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-294P-201ENST00000364999 102 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-342P-201ENST00000384521 104 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNY1P7-201ENST00000384743 110 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR524-201ENST00000385242 87 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR653-201ENST00000385279 96 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-679P-201ENST00000391003 106 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNA5SP212-201ENST00000391223 107 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 AL161935.2-201ENST00000414627 60 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU7-41P-201ENST00000515917 61 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 SCARNA23-201ENST00000516060 130 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 SNORA31.11-201ENST00000516528 139 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR548AO-201ENST00000579992 96 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 FAM71BP1-201ENST00000604431 523 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQA1Q5Y7H0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQA1Q5Y7H0 SNORA67.1-201ENST00000364749 141 ntBASIC2.04□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR513A1-201ENST00000385138 129 ntBASIC2.04□□□□□ -2.08
HLA-DQA1Q5Y7H0 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
HLA-DQA1Q5Y7H0 AC245047.7-201ENST00000440265 293 ntBASIC2.04□□□□□ -2.08
HLA-DQA1Q5Y7H0 JTBP1-201ENST00000441314 247 ntBASIC2.04□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-521P-201ENST00000516663 105 ntBASIC2.04□□□□□ -2.08
HLA-DQA1Q5Y7H0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 Y_RNA.93-201ENST00000363066 109 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-832P-201ENST00000363319 107 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR144-201ENST00000384886 86 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 Y_RNA.601-201ENST00000410500 113 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-602P-201ENST00000411155 105 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 AC090844.1-201ENST00000422019 156 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 RNU6-322P-201ENST00000516010 103 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 SNORA72.7-201ENST00000516349 94 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR4694-201ENST00000578534 80 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 AL773524.1-201ENST00000614065 229 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 MIR8065-201ENST00000620577 100 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 Z97988.1-201ENST00000637697 135 ntBASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DQA1Q5Y7H0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.09
HLA-DQA1Q5Y7H0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DQA1Q5Y7H0 Y_RNA.107-201ENST00000363190 121 ntBASIC2.02□□□□□ -2.09
HLA-DQA1Q5Y7H0 SNORD73B-201ENST00000364394 72 ntBASIC2.02□□□□□ -2.09
HLA-DQA1Q5Y7H0 SNORA18-201ENST00000384416 132 ntBASIC2.02□□□□□ -2.09
HLA-DQA1Q5Y7H0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HLA-DQA1Q5Y7H0 AL451046.2-201ENST00000403074 277 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 258.6 ms