Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC106754.2-201ENST00000623006 233 ntBASIC2.55□□□□□ -2
USPL1Q5W0Q7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.54□□□□□ -2
USPL1Q5W0Q7 RNU6-1104P-201ENST00000384723 104 ntBASIC2.54□□□□□ -2
USPL1Q5W0Q7 MT-TI-201ENST00000387365 69 ntBASIC2.54□□□□□ -2
USPL1Q5W0Q7 AC108729.3-201ENST00000513484 108 ntBASIC2.54□□□□□ -2
USPL1Q5W0Q7 AC068339.1-201ENST00000526965 141 ntBASIC2.54□□□□□ -2
USPL1Q5W0Q7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.54□□□□□ -2
USPL1Q5W0Q7 MIR5009-201ENST00000578736 100 ntBASIC2.54□□□□□ -2
USPL1Q5W0Q7 HSPE1P19-201ENST00000603327 295 ntBASIC2.54□□□□□ -2
USPL1Q5W0Q7 SNRPGP19-201ENST00000603826 189 ntBASIC2.54□□□□□ -2
USPL1Q5W0Q7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USPL1Q5W0Q7 MIRLET7G-201ENST00000362280 84 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 Y_RNA.328-201ENST00000365208 113 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 Y_RNA.531-201ENST00000384589 121 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 MIR1912-201ENST00000410389 80 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 POLR2J4-204ENST00000418424 324 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.53□□□□□ -2
USPL1Q5W0Q7 RPS23P4-201ENST00000487908 423 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 RNU6-1053P-201ENST00000515930 101 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 SNORA31.4-201ENST00000516049 129 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 SNORA74.3-201ENST00000517108 154 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 AC004812.1-201ENST00000540773 146 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 MIR548AR-201ENST00000582191 57 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 AC243994.1-201ENST00000618627 109 ntBASIC2.53□□□□□ -2
USPL1Q5W0Q7 Y_RNA.78-201ENST00000362970 110 ntBASIC2.52□□□□□ -2.01
USPL1Q5W0Q7 RNU6-756P-201ENST00000383997 107 ntBASIC2.52□□□□□ -2.01
USPL1Q5W0Q7 RNA5SP212-201ENST00000391223 107 ntBASIC2.52□□□□□ -2.01
USPL1Q5W0Q7 AL445685.2-201ENST00000422551 342 ntBASIC2.52□□□□□ -2.01
USPL1Q5W0Q7 RNU7-43P-201ENST00000516554 64 ntBASIC2.52□□□□□ -2.01
USPL1Q5W0Q7 RNU6-958P-201ENST00000516995 106 ntBASIC2.52□□□□□ -2.01
USPL1Q5W0Q7 AC022523.2-201ENST00000561045 150 ntBASIC2.52□□□□□ -2.01
USPL1Q5W0Q7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.52□□□□□ -2.01
USPL1Q5W0Q7 RNU6-661P-201ENST00000362409 107 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 SNORD115-2-201ENST00000362842 82 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 U8.6-201ENST00000364939 135 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 SNORD115-20-201ENST00000365099 82 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 SNORA51.5-201ENST00000384126 131 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 AC003989.2-201ENST00000440224 169 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 Y_RNA.677-201ENST00000516401 85 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 FAM106DP-201ENST00000586416 501 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 AL162726.3-218ENST00000636401 95 ntBASIC2.51□□□□□ -2.01
USPL1Q5W0Q7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 Y_RNA.226-201ENST00000364337 114 ntBASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 Y_RNA.344-201ENST00000365381 112 ntBASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 RPL23AP6-201ENST00000446637 472 ntBASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 snoU13.16-201ENST00000459350 104 ntBASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 RNU7-6P-201ENST00000516845 62 ntBASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 MIR5089-201ENST00000580047 84 ntBASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 MIR4791-201ENST00000607666 84 ntBASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 MIR6841-201ENST00000637129 72 ntBASIC2.5□□□□□ -2.01
USPL1Q5W0Q7 SNORD115-19-201ENST00000363098 82 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 SNORD115-18-201ENST00000363293 82 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 SNORD115-17-201ENST00000364612 82 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 Y_RNA.544-201ENST00000384650 113 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 SNORD28B-201ENST00000390993 75 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 AL512326.2-201ENST00000426359 151 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 RNU7-113P-201ENST00000459273 62 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 RNA5SP82-201ENST00000516707 92 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 MIR4781-201ENST00000585250 76 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 AL020996.3-201ENST00000606617 222 ntBASIC2.49□□□□□ -2.01
USPL1Q5W0Q7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 SNORA22.1-201ENST00000362701 134 ntBASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 RNU6-457P-201ENST00000363999 107 ntBASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 MIR194-1-201ENST00000384892 85 ntBASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 SNORA26.6-201ENST00000391256 115 ntBASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 RNU6-322P-201ENST00000516010 103 ntBASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 RNU6-537P-201ENST00000517277 103 ntBASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 MIR6717-201ENST00000622747 73 ntBASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USPL1Q5W0Q7 RNU6-1255P-201ENST00000363434 112 ntBASIC2.47□□□□□ -2.01
USPL1Q5W0Q7 SNORA51.10-201ENST00000384418 136 ntBASIC2.47□□□□□ -2.01
USPL1Q5W0Q7 RNU4-69P-201ENST00000410677 143 ntBASIC2.47□□□□□ -2.01
USPL1Q5W0Q7 AC004965.1-201ENST00000413033 213 ntBASIC2.47□□□□□ -2.01
USPL1Q5W0Q7 RNA5SP57-201ENST00000459463 123 ntBASIC2.47□□□□□ -2.01
USPL1Q5W0Q7 AC113410.1-201ENST00000505029 247 ntBASIC2.47□□□□□ -2.01
USPL1Q5W0Q7 Y_RNA.818-201ENST00000618813 71 ntBASIC2.47□□□□□ -2.01
USPL1Q5W0Q7 MIR653-201ENST00000385279 96 ntBASIC2.46□□□□□ -2.02
USPL1Q5W0Q7 SNORD13-201ENST00000459299 104 ntBASIC2.46□□□□□ -2.02
USPL1Q5W0Q7 AC087741.2-201ENST00000619415 172 ntBASIC2.46□□□□□ -2.02
USPL1Q5W0Q7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
USPL1Q5W0Q7 RNA5SP160-201ENST00000364866 120 ntBASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 RNA5SP190-201ENST00000365222 118 ntBASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 Y_RNA.507-201ENST00000384500 99 ntBASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 AC025033.1-201ENST00000463883 194 ntBASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 snoU13.31-201ENST00000607291 104 ntBASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 AP001318.4-201ENST00000616637 121 ntBASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
USPL1Q5W0Q7 Y_RNA.354-201ENST00000365448 111 ntBASIC2.44□□□□□ -2.02
USPL1Q5W0Q7 RNU6-203P-201ENST00000384038 104 ntBASIC2.44□□□□□ -2.02
USPL1Q5W0Q7 RNU6-816P-201ENST00000390914 107 ntBASIC2.44□□□□□ -2.02
USPL1Q5W0Q7 SNORD77B-201ENST00000391112 67 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms